Gene PP_1230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1230 
Symbol 
ID1046153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1407546 
End bp1409054 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content62% 
IMG OID637144631 
Producthypothetical protein 
Protein accessionNP_743390 
Protein GI26987965 
COG category[S] Function unknown 
COG ID[COG5339] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.747865 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.718715 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAT CAGTTGGCAT CCTTTCCGGC CTGGCTATCG CCATTGCCGT CGCAACTACC 
GCAGGCGCCT GGTACACCGG CAAGCAGCTG CCGGCAGAGC TGGACAACGC CCTTGCACGC
AGCAACGCCG AACTCAAAAA GGCCCTGGTC AGTACCGGTG GTAGCATGAG CATCGAGCGT
GTGTCGCTGG AGCAGCATCT CTTCAGCAGC ACTGCCCAGT ACCGGCTCAA GGCTCGCGAC
ATCAATGTGG GGCAGGGCGA GGTGATCAAT TTTGACGTGG GCGTGACCGA CCAGATCGAG
CACGGCCCGT TTCCGTGGTC GAGGGTCAGG TCACTGAAGC TGATGCCGGT AATGGCGGTC
AGCAACAGCA CGCTGCAGAA GGATGACGCC GTTGCGCCAT GGTTCGCCGC TGCGGGTGAA
AAGGCCCCGA TCAGCGCGCA GACCAGCCTG GGTTACGGCG GCAATGTGGT CAGCCAGGTT
CAGCTGGCGC CGCTCAAGTT TGACGAAGCG GATGGCAACA GCCTTGACTT CTCGGGCATG
CAGTTCGAAG TCAGTGGGGA CAAGGAGGGC AAGGCCTCGA AGTTCCACGG CCAGGCCGAC
AGGCTGGTGA TGAAATGGGT GCATGACGAC CAGCCGCCGG CCACCTTCGA GCTCAAAGGG
CTGACGTTTG GCGGTAACCT CGCAGCCACC GCGCACGATG CCATCTATGT CGGCAACGTC
GATATGGCGT TGGCCGAAAC CAAGGTCATC CTTGGGCCGA AACAGCAGGT GCTGCTGATC
AAGGGCCTGG AACAGAACGC CTTGCAAACC CTCGAAGGCA CGGACACCGT AGGTGGTCGC
GCGGAGTACA AGGTCGGTGA CATCAGCTGG GATGGCCGCG CGGTAGGCAA GGCGCAGATG
GCGGTGAGCG TGACCTCGGT CAACGCCCCG GCGCTGCAGG CCTTGTCGAA GTGGTACCAG
TCGCACTTGC CGGAGTTCGA GGCCGCCAGT GCGGCTGGCC AGCCGGTACC GCAGATCCAG
ATGGACGACG CCGAAAAGGC CCGCTTCCAG GGTGACTTGC AGAAGTTGCT GGCCGCCAAG
CCCAGGCTGG CGGTGGAAAA CCTGTCGTTC AAGACCGCCA ATGGCGAGAG CCGTTTCAAC
CTGTCGATGG ACCTCGCCGC GCCGGCCAGC TTCGACCTGC CGCCGGACCA ACTGAGCAAG
CAGATCATCA CGGAGGTGAA AGGCAAGCTG TCGCTGTCCA AGCCGATGAT CGGTGACCTG
GCGACCTTGC AGGCCTTGCT GGATGGCCAG ACCGACGCCC AAGCGATTGC CATGCAGTCG
AGCCAGGCGG GGGAGATGGT CGGCATGATG GCGCTGCAGA GCGGCATGGC CACCGTGCAG
GGCGATGATG TGGTCAGCAG CCTGCACTAT GCCGATGGCA TGGTCGATTT CAATGGCCGA
AAAATGACCG TTGAAGAATT TGCCATGTTC ATGGCGGCGC ATCTGGGGGC CCTGTCGCCG
CAGGGGTGA
 
Protein sequence
MKKSVGILSG LAIAIAVATT AGAWYTGKQL PAELDNALAR SNAELKKALV STGGSMSIER 
VSLEQHLFSS TAQYRLKARD INVGQGEVIN FDVGVTDQIE HGPFPWSRVR SLKLMPVMAV
SNSTLQKDDA VAPWFAAAGE KAPISAQTSL GYGGNVVSQV QLAPLKFDEA DGNSLDFSGM
QFEVSGDKEG KASKFHGQAD RLVMKWVHDD QPPATFELKG LTFGGNLAAT AHDAIYVGNV
DMALAETKVI LGPKQQVLLI KGLEQNALQT LEGTDTVGGR AEYKVGDISW DGRAVGKAQM
AVSVTSVNAP ALQALSKWYQ SHLPEFEAAS AAGQPVPQIQ MDDAEKARFQ GDLQKLLAAK
PRLAVENLSF KTANGESRFN LSMDLAAPAS FDLPPDQLSK QIITEVKGKL SLSKPMIGDL
ATLQALLDGQ TDAQAIAMQS SQAGEMVGMM ALQSGMATVQ GDDVVSSLHY ADGMVDFNGR
KMTVEEFAMF MAAHLGALSP QG