Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1230 |
Symbol | |
ID | 1046153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 1407546 |
End bp | 1409054 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637144631 |
Product | hypothetical protein |
Protein accession | NP_743390 |
Protein GI | 26987965 |
COG category | [S] Function unknown |
COG ID | [COG5339] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.747865 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.718715 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGAAAT CAGTTGGCAT CCTTTCCGGC CTGGCTATCG CCATTGCCGT CGCAACTACC GCAGGCGCCT GGTACACCGG CAAGCAGCTG CCGGCAGAGC TGGACAACGC CCTTGCACGC AGCAACGCCG AACTCAAAAA GGCCCTGGTC AGTACCGGTG GTAGCATGAG CATCGAGCGT GTGTCGCTGG AGCAGCATCT CTTCAGCAGC ACTGCCCAGT ACCGGCTCAA GGCTCGCGAC ATCAATGTGG GGCAGGGCGA GGTGATCAAT TTTGACGTGG GCGTGACCGA CCAGATCGAG CACGGCCCGT TTCCGTGGTC GAGGGTCAGG TCACTGAAGC TGATGCCGGT AATGGCGGTC AGCAACAGCA CGCTGCAGAA GGATGACGCC GTTGCGCCAT GGTTCGCCGC TGCGGGTGAA AAGGCCCCGA TCAGCGCGCA GACCAGCCTG GGTTACGGCG GCAATGTGGT CAGCCAGGTT CAGCTGGCGC CGCTCAAGTT TGACGAAGCG GATGGCAACA GCCTTGACTT CTCGGGCATG CAGTTCGAAG TCAGTGGGGA CAAGGAGGGC AAGGCCTCGA AGTTCCACGG CCAGGCCGAC AGGCTGGTGA TGAAATGGGT GCATGACGAC CAGCCGCCGG CCACCTTCGA GCTCAAAGGG CTGACGTTTG GCGGTAACCT CGCAGCCACC GCGCACGATG CCATCTATGT CGGCAACGTC GATATGGCGT TGGCCGAAAC CAAGGTCATC CTTGGGCCGA AACAGCAGGT GCTGCTGATC AAGGGCCTGG AACAGAACGC CTTGCAAACC CTCGAAGGCA CGGACACCGT AGGTGGTCGC GCGGAGTACA AGGTCGGTGA CATCAGCTGG GATGGCCGCG CGGTAGGCAA GGCGCAGATG GCGGTGAGCG TGACCTCGGT CAACGCCCCG GCGCTGCAGG CCTTGTCGAA GTGGTACCAG TCGCACTTGC CGGAGTTCGA GGCCGCCAGT GCGGCTGGCC AGCCGGTACC GCAGATCCAG ATGGACGACG CCGAAAAGGC CCGCTTCCAG GGTGACTTGC AGAAGTTGCT GGCCGCCAAG CCCAGGCTGG CGGTGGAAAA CCTGTCGTTC AAGACCGCCA ATGGCGAGAG CCGTTTCAAC CTGTCGATGG ACCTCGCCGC GCCGGCCAGC TTCGACCTGC CGCCGGACCA ACTGAGCAAG CAGATCATCA CGGAGGTGAA AGGCAAGCTG TCGCTGTCCA AGCCGATGAT CGGTGACCTG GCGACCTTGC AGGCCTTGCT GGATGGCCAG ACCGACGCCC AAGCGATTGC CATGCAGTCG AGCCAGGCGG GGGAGATGGT CGGCATGATG GCGCTGCAGA GCGGCATGGC CACCGTGCAG GGCGATGATG TGGTCAGCAG CCTGCACTAT GCCGATGGCA TGGTCGATTT CAATGGCCGA AAAATGACCG TTGAAGAATT TGCCATGTTC ATGGCGGCGC ATCTGGGGGC CCTGTCGCCG CAGGGGTGA
|
Protein sequence | MKKSVGILSG LAIAIAVATT AGAWYTGKQL PAELDNALAR SNAELKKALV STGGSMSIER VSLEQHLFSS TAQYRLKARD INVGQGEVIN FDVGVTDQIE HGPFPWSRVR SLKLMPVMAV SNSTLQKDDA VAPWFAAAGE KAPISAQTSL GYGGNVVSQV QLAPLKFDEA DGNSLDFSGM QFEVSGDKEG KASKFHGQAD RLVMKWVHDD QPPATFELKG LTFGGNLAAT AHDAIYVGNV DMALAETKVI LGPKQQVLLI KGLEQNALQT LEGTDTVGGR AEYKVGDISW DGRAVGKAQM AVSVTSVNAP ALQALSKWYQ SHLPEFEAAS AAGQPVPQIQ MDDAEKARFQ GDLQKLLAAK PRLAVENLSF KTANGESRFN LSMDLAAPAS FDLPPDQLSK QIITEVKGKL SLSKPMIGDL ATLQALLDGQ TDAQAIAMQS SQAGEMVGMM ALQSGMATVQ GDDVVSSLHY ADGMVDFNGR KMTVEEFAMF MAAHLGALSP QG
|
| |