Gene PP_1226 details

Gene Information

• Locus tag: PP_1226
• Symbol: exsB
• ID: 1046076
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas putida KT2440
• Kingdom: Bacteria
• Replicon accession: NC_002947
• Strand: +
• Start bp: 1401669
• End bp: 1402343
• Gene Length: 675 bp
• Protein Length: 224 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637144626
• Product: exsB protein
• Protein accession: NP_743386
• Protein GI: 26987961
• COG category: [R] General function prediction only
• COG ID: [COG0603] Predicted PP-loop superfamily ATPase
• TIGRFAM ID: [TIGR00364] exsB protein

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 14
• Fosmid unclonability p-value: 0.861838
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACAGAAA AACGCGCAGT AATCCTGTTG TCCGGCGGCC TGGATTCGGC CACCGTGGTT 
GCCATGGCCA AGGCCGAAGG CTACAGCTGC TACACCATGA GCTTCGACTA CGGCCAGCGT 
CATCGTGCCG AGCTGAACGC CGCTGCCCGC GTGGCCCGCG ACCTGGGTGT GGTCGAGCAC 
AAGGTGATTG GGCTGAACCT CGACGGCATC GGCGGTTCTG CATTGACCGA CAGCAGCATC 
GACGTGCCGG AAGCCCCGGG TGAAGGCATT CCGGTCACTT ATGTGCCGGC GCGCAACACC 
GTGTTCCTTT CGCTGGCCCT GGGTTGGGCC GAAGTACTGG AAGCGCGCGA CATCTTCATT 
GGCGTCAACG CCGTGGATTA CTCCGGCTAC CCGGATTGCC GACCCGAGTT CGTCGAGGCC 
TTCGAGCGCA TGGCCAACCT GGCGACCAAG GCTGGCGTAG AAGGGCAGGG CTTCCGCATC 
CAGGCGCCGC TGCAGAACAT GAGCAAGGCG CAGATCGTGC AGGCCGGTAT GGCCCGTGGC 
GTGGACTACA GCCTGACCGT TTCCTGCTAC CAGGCCGACG ATGACGGCCG CGCCTGTGGC 
AAATGCGACA GCTGCCGCCT GCGCGCCGAT GGTTTCAAGG CCGCCGGTAT CGAAGATCCG 
ACTCGGTATT TTTGA 

 

Protein sequence

MTEKRAVILL SGGLDSATVV AMAKAEGYSC YTMSFDYGQR HRAELNAAAR VARDLGVVEH 
KVIGLNLDGI GGSALTDSSI DVPEAPGEGI PVTYVPARNT VFLSLALGWA EVLEARDIFI 
GVNAVDYSGY PDCRPEFVEA FERMANLATK AGVEGQGFRI QAPLQNMSKA QIVQAGMARG 
VDYSLTVSCY QADDDGRACG KCDSCRLRAD GFKAAGIEDP TRYF