Gene PP_1224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1224 
Symbol 
ID1046140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1400029 
End bp1400835 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content61% 
IMG OID637144624 
Producthypothetical protein 
Protein accessionNP_743384 
Protein GI26987959 
COG category[S] Function unknown 
COG ID[COG1729] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02795] tol-pal system protein YbgF 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.899362 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATGT GCCGCCGTGT AGTAACCGTC CTCGCACTCA GCCTGCCGCT TGCGGCCTGG 
GCTGAGGTCC CTGTAGTAGA TGACAACGCA GGCAGCTATC CGCCTGCGGG TTATGGCACG
AGCGGCGCCT ATGCCGGGTC AGGGGCTTCG GCCCCTGCCT CTGCACAGGG CCAGCTGTTC
ATGCAGCTGC AACAGATGCA GGATCAGCTT TCCCGCCAGC AAGGCATCAT CGAAGAGCTG
CAAAACGATG TGTCCCGCAT GAAGCAGGAA AACCTGGAGC GTTACCAGGA CCTGGACCGT
CGCATCAACA GTGGCGCTGC GCCTGCCGCA ACCCCTGACA ATTCCTCCGG TGGTGGCGCG
TCCAATGCCG CCCCCGATGC CGCAGCAGGT GCTGCTGCGC AACAACCGGC CGGCAGTAGC
CAGCCCGGTG ATCCGGCGAA AGAGAAGCTC TATTACGACG CAGCTTTCGA CCTGATCAAA
CAGAAAGACT TCGACAAGGC CAGCCAGGCG TTCAACGCCT TCCTGCGCAA GTACCCCAAC
AGCCAGTACG CCGGTAATGC CCAATACTGG TTGGGTGAAG TGAACCTGGC CAAGGGTGAC
CTGCAAGGCG CCAGCCAGGC CTTTGCCCAG GTCAGCCAAA AGTACCCGAA GCACAGCAAG
GTGCCAGATT CGCTGTACAA ACTGGCTGAT GTCGAGCGCC GTATGGGCCA TACCGACAAG
GTAAAAGGCA TCCTTCAGCA GGTCGTGACC CAGTACCCCG GCACCTCTGC CGCTCAACTG
GCCCAGCGTG ACCTGCAGAA GCTCTAG
 
Protein sequence
MRMCRRVVTV LALSLPLAAW AEVPVVDDNA GSYPPAGYGT SGAYAGSGAS APASAQGQLF 
MQLQQMQDQL SRQQGIIEEL QNDVSRMKQE NLERYQDLDR RINSGAAPAA TPDNSSGGGA
SNAAPDAAAG AAAQQPAGSS QPGDPAKEKL YYDAAFDLIK QKDFDKASQA FNAFLRKYPN
SQYAGNAQYW LGEVNLAKGD LQGASQAFAQ VSQKYPKHSK VPDSLYKLAD VERRMGHTDK
VKGILQQVVT QYPGTSAAQL AQRDLQKL