Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1224 |
Symbol | |
ID | 1046140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 1400029 |
End bp | 1400835 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637144624 |
Product | hypothetical protein |
Protein accession | NP_743384 |
Protein GI | 26987959 |
COG category | [S] Function unknown |
COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR02795] tol-pal system protein YbgF |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.899362 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTATGT GCCGCCGTGT AGTAACCGTC CTCGCACTCA GCCTGCCGCT TGCGGCCTGG GCTGAGGTCC CTGTAGTAGA TGACAACGCA GGCAGCTATC CGCCTGCGGG TTATGGCACG AGCGGCGCCT ATGCCGGGTC AGGGGCTTCG GCCCCTGCCT CTGCACAGGG CCAGCTGTTC ATGCAGCTGC AACAGATGCA GGATCAGCTT TCCCGCCAGC AAGGCATCAT CGAAGAGCTG CAAAACGATG TGTCCCGCAT GAAGCAGGAA AACCTGGAGC GTTACCAGGA CCTGGACCGT CGCATCAACA GTGGCGCTGC GCCTGCCGCA ACCCCTGACA ATTCCTCCGG TGGTGGCGCG TCCAATGCCG CCCCCGATGC CGCAGCAGGT GCTGCTGCGC AACAACCGGC CGGCAGTAGC CAGCCCGGTG ATCCGGCGAA AGAGAAGCTC TATTACGACG CAGCTTTCGA CCTGATCAAA CAGAAAGACT TCGACAAGGC CAGCCAGGCG TTCAACGCCT TCCTGCGCAA GTACCCCAAC AGCCAGTACG CCGGTAATGC CCAATACTGG TTGGGTGAAG TGAACCTGGC CAAGGGTGAC CTGCAAGGCG CCAGCCAGGC CTTTGCCCAG GTCAGCCAAA AGTACCCGAA GCACAGCAAG GTGCCAGATT CGCTGTACAA ACTGGCTGAT GTCGAGCGCC GTATGGGCCA TACCGACAAG GTAAAAGGCA TCCTTCAGCA GGTCGTGACC CAGTACCCCG GCACCTCTGC CGCTCAACTG GCCCAGCGTG ACCTGCAGAA GCTCTAG
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Protein sequence | MRMCRRVVTV LALSLPLAAW AEVPVVDDNA GSYPPAGYGT SGAYAGSGAS APASAQGQLF MQLQQMQDQL SRQQGIIEEL QNDVSRMKQE NLERYQDLDR RINSGAAPAA TPDNSSGGGA SNAAPDAAAG AAAQQPAGSS QPGDPAKEKL YYDAAFDLIK QKDFDKASQA FNAFLRKYPN SQYAGNAQYW LGEVNLAKGD LQGASQAFAQ VSQKYPKHSK VPDSLYKLAD VERRMGHTDK VKGILQQVVT QYPGTSAAQL AQRDLQKL
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