Gene PP_1202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1202 
Symbol 
ID1045883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1377630 
End bp1380272 
Gene Length2643 bp 
Protein Length880 aa 
Translation table11 
GC content65% 
IMG OID637144599 
Producthypothetical protein 
Protein accessionNP_743362 
Protein GI26987937 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein
[COG2898] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCGC ACAATCCCGA ACCTCCGGTG CCACTCGCTA CGGCACTACC CGGTGCTGTG 
CAGCGCCTGC CCCTACTCGA ACGCCTGAGT CGCTACCGCC AGCCCATAGG CCTGATGGTG
ACCCTGTTAC TGTTCACGAT GGCCTTGATT GCCTGCCGCC ACCTGCTGAG CGAGCTGGAC
ATCTATGCCT TGCACGATGC CATGCTCAGC GTGCCCACCC AATCATTGCT GGGCGCCTTG
CTGGCGACGG TGATCGGCTT TGTGATCCTG CTGGGCTACG AGTGGTCGGC CAGCCGCTAT
GCGGGCGTGA AACTGCCAGC ACGCAGCCTG GCACTGGGCG GCTTCAGCGC CTTTGCCATC
GGCAACGCCA TCGGCCTGTC GATGCTCTCT GGCGGCTCGG TTCGCTATCG CCTGTACGCA
CGGCAAGGGC TTGGTGCTGG CGAAGTCGCA CGCATGACCG TGTTTGCCAG CCTGTCACTT
GGCTGCGCGC TGCCGCCCCT GGCCGCCTTG GCGACATTGA GCAACCTGCC GGCGGCCTCG
ACAGCGCTGG GGTTGGCGCC CGGCCTGCTG GCAGCTGTTG CCAGCGCCGT GCTGGTGGTG
TCTGCCTTAC TGGTAATTGG CTTGTACCGC CGACGCCTGG CCGAGCAACC GGCGGCCAAT
AACCTGCTCG TTCAACTGGG GCGGCGCACA CTTCGCCTGC CGGATGCACG CCTGGCGGCC
CTGCAATTGC TGATTACCGC GTTGGATGTG GCGGCGGCTG CCACCGTGCT CTACCTGTTG
CTGCCCGAAG CCCCTCCTTT CGGCGCGTTC GTGCTGGTGT ACCTGCTGGC CTTGGCTGCG
GGCGTGCTCA GCCACGTACC GGGCGGCGTC GGGGTGTTCG AAGCGATCCT GCTGGCGGCC
TTTGCCGACC AGCTCGGTGC CGCGCCGCTG GCGGCAGCCT TGCTGCTGTA CCGGCTGATC
TATGTGGTAC TGCCACTGCT GCTGGCCTGC GTGTTGCTGC TGGCCAATGA AGCCCGACGC
CTGCTGTTTG CGCAACAGGC CATCAAGGCC GCTTCGGGGC TGGCCGCGCC GATCCTGTCG
ATCCTGGTGT TCCTGTCCGG CGTGGTGCTG CTGTTTTCCG GTGCCACGCC CGAGATAGAT
ACGCGCCTGG AGCATATGGG CTTCCTGGTG CCACACCGGC TGATCGATGC CTCTCATTTC
GGCGCCAGCC TGATCGGTGT GCTCTGCCTG CTGCTGGCCC AAGGCCTGCG CCGGCGCCTG
TCCGCCGCCT GGCTACTGAC CACCGTGCTG TTGCTGGTCG GCGCCCTGCT GTCGCTGTTG
AAGGGCTTTG ACTGGGAAGA GGCTTGCCTG CTGACCTTTA CCGCCGCCCT GCTCGCGCTG
TTCCGCCGCT CGTTCTATCG CCCCAGCCGA CTGCTGGAGC TGCCCTTCTC GCCGGTGTTC
CTGGTGGCCA GCGCCTGTAC GGTGGGCGCA TCAGTGTGGC TTCTGCTGTT CGCCTACCAG
GATGTGCCTT ACAGCCATCA GCTGTGGTGG CAGTTCACCC TCGATGCCGA TGCGCCACGG
GGCCTGCGCG CCGCCATGGG CAGTGCCTTG CTGCTGGCTG CCGTGGCACT GACGTGGCTG
CTGCGTACAG CGCCACCCGT GATCCACCTG CCTGACGAAG AAGAGTTGCA ACGCGCCAAC
CGTATCCTGC AGGCCTCCGA CCAGCCCGAC GGTGGCCTGG CGCTGACTGG CGACAAGGCG
TTGCTGTTCC ACCCGCGTGG TAACGCGTTC CTCATGTATG CCCGGCGCGG CCGCAGCCTG
GTGGCGTTGT ACGACCCGAT AGGCCCGGCC CAGGAACGCG CCGAGATGAT CTGGCAGTTC
CGCGACCTGT GCGACCTGCA CCACGCACGC CCCGTGTTCT ATCAGGTGCG CGCAGAGAAC
CTGCCGTTCT ACATGGACAT CGGCCTGACC GCATTGAAGC TCGGTGAAGA AGCCCGGGTC
GACTTGCGCC GCTTCGACCT TGAAGCCAAA GGCAAGGAGA TGAAAGACCT GCGCTACACC
TGGAACCGCG GCGGACGCGA TGGCCTGAGC CTGGAGATCC ATGAGCCCGG CCACGCCCCG
CTGGCTGAGC TGAAGGAAAT TTCCGACGCC TGGCTCGGCG GCAAGAACGT GCGCGAGAAA
GGCTTCTCGC TGGGGCGCTT CAGCCCAGAC TACCTGCAGC ACTTCCGCAT AGCCCTGATT
CGCTTCCAGG GCCGCCCGGT AGCCTTCGCC AACCTGCTGG AAACCCATGG AAACGAACTG
GCCAGCCTCG ACCTGATGCG TGCGCACCCC GAAGCGCCAA AGCTGACCAT GGAATTCATG
ATGATCGGCT TGATCCTGCA TTACAAAAGC CATGACTACG GGCGTTTCAG CCTGGGCATG
GTACCGCTGT CCGGCCTGCA ACCAAGGCGC GGCGCACCCT TGACCCAGCG CTTGGGTTCG
CTGGTGTTCC GCCGTGGTGA GCAGCTTTAC AACTTCCAGG GGCTTCGACG CTTCAAGGAC
AAGTTCCAGC CGGACTGGGA ACCCCGCTAC ATGGCCGTGC CAGCCGGGCT CGACCCGCTG
GTGGCACTGG CCGACACCGC CGCCCTGATT GCAGGCGGCC TGACTGGATT GGTGAAACGC
TGA
 
Protein sequence
MTSHNPEPPV PLATALPGAV QRLPLLERLS RYRQPIGLMV TLLLFTMALI ACRHLLSELD 
IYALHDAMLS VPTQSLLGAL LATVIGFVIL LGYEWSASRY AGVKLPARSL ALGGFSAFAI
GNAIGLSMLS GGSVRYRLYA RQGLGAGEVA RMTVFASLSL GCALPPLAAL ATLSNLPAAS
TALGLAPGLL AAVASAVLVV SALLVIGLYR RRLAEQPAAN NLLVQLGRRT LRLPDARLAA
LQLLITALDV AAAATVLYLL LPEAPPFGAF VLVYLLALAA GVLSHVPGGV GVFEAILLAA
FADQLGAAPL AAALLLYRLI YVVLPLLLAC VLLLANEARR LLFAQQAIKA ASGLAAPILS
ILVFLSGVVL LFSGATPEID TRLEHMGFLV PHRLIDASHF GASLIGVLCL LLAQGLRRRL
SAAWLLTTVL LLVGALLSLL KGFDWEEACL LTFTAALLAL FRRSFYRPSR LLELPFSPVF
LVASACTVGA SVWLLLFAYQ DVPYSHQLWW QFTLDADAPR GLRAAMGSAL LLAAVALTWL
LRTAPPVIHL PDEEELQRAN RILQASDQPD GGLALTGDKA LLFHPRGNAF LMYARRGRSL
VALYDPIGPA QERAEMIWQF RDLCDLHHAR PVFYQVRAEN LPFYMDIGLT ALKLGEEARV
DLRRFDLEAK GKEMKDLRYT WNRGGRDGLS LEIHEPGHAP LAELKEISDA WLGGKNVREK
GFSLGRFSPD YLQHFRIALI RFQGRPVAFA NLLETHGNEL ASLDLMRAHP EAPKLTMEFM
MIGLILHYKS HDYGRFSLGM VPLSGLQPRR GAPLTQRLGS LVFRRGEQLY NFQGLRRFKD
KFQPDWEPRY MAVPAGLDPL VALADTAALI AGGLTGLVKR