| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1197 |
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| Symbol | rimO |
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| ID | 1045888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 1371797 |
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| End bp | 1373209 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637144594 |
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| Product | ribosomal protein S12 methylthiotransferase |
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| Protein accession | NP_743357 |
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| Protein GI | 26987932 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATCAGAG GCGCCAAAAG CGCCCGTCAA GTTCGCCCCC GATTCCGGCC GGGCGACCTG
CATTCAATAC CGAGGTTAGT CATGTCCACC ACGCCCGCCA CCCCCAAGGT AGGTTTCGTA
AGCCTGGGTT GCCCAAAAGC CCTGGTCGAC TCCGAGCGCA TCCTGACCCA GCTGCGCATG
GAAGGCTATG AAGTCGTACC CACCTACGAG GACGCCGACG TGGTGGTGGT CAACACCTGC
GGCTTCATCG ACAGCGCCAA GGCCGAATCG CTGGAAGTGA TCGGCGAAGC CATCAAGGAA
AACGGCAAGG TGATCGTCAC CGGCTGCATG GGCGTCGAAG AAGGCAGCAT CCGTGACGTG
CACCCAAGCG TGTTGTCGGT CACTGGCCCG CAGCAGTACG AGCAGGTAGT CAACGCCGTT
CACGAAGTGG TGCCGCCGCG TCAGGACCAC AACCCGCTGA TCGACCTGGT GCCGCCACAG
GGCGTCAAGC TGACCCCGCG CCACTATGCC TACCTGAAGA TCTCCGAAGG CTGCAACCAC
AGCTGCAGCT TCTGCATCAT CCCGTCGATG CGCGGCAAGC TGGTCAGCCG CCCGGTGGGT
GAAGTGCTGA GCGAGGCCGA GCGCCTGGTC AAGGCCGGAG TCAAGGAAAT CCTGGTGATT
TCCCAGGACA CCAGCGCCTA CGGCGTCGAC GTCAAGTACA AGACCGACTT CTGGAACGGC
CGCCCGGTCA AGACCCGCAT GCTCGAGCTG TGCGAAGCAC TGAGCAGCCT GGGCGCCTGG
GTACGCCTGC ACTATGTGTA CCCTTACCCG AATGTTGACG ACGTGATCCC GCTGATGGCT
GCCGGCAAGA TCCTGCCGTA CCTGGACATC CCATTCCAGC ACGCCAGCCC GAAAGTGCTC
AAGTCGATGA AGCGCCCGGC CTTCGAAGAC CGCACCCTGG CACGCATCAA GAACTGGCGC
GAGCAATGCC CTGAGCTGGT GATCCGTTCC ACCTTCATCG TCGGCTTCCC GGGCGAGACC
GAGGAAGACT TCCAGTACCT GCTGGACTGG CTGACCGAAG CCCAGCTCGA CCGCGTGGGC
TGCTTCCAGT ACTCGCCGGT AGAAGGCGCC CCGGCCAACG ACCTGGGCCT GGCCGAAGTA
CCGGACGACG TCAAGCAAGA GCGCTGGGAC CGCTTCATGG CCCACCAGCA GGCCATCAGT
GCTGCCCGCC TGCAATTGCG CATCGGCAAG GAAATCGACG TGCTGATCGA CGAAGTCGAG
GAACAAGGTT CGGTTGGCCG CAGCTTCTTC GATGCACCGG AAATCGACGG CAGCGTGTTC
ATCGATGGCG ACCATGGTTT CAAGCCAGGC GACAAAGTGC GTTGCCGTGT GGTGGATGCC
GACGAGTACG ACATGTGGGC TGAACCCATC TAA
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| Protein sequence | MIRGAKSARQ VRPRFRPGDL HSIPRLVMST TPATPKVGFV SLGCPKALVD SERILTQLRM
EGYEVVPTYE DADVVVVNTC GFIDSAKAES LEVIGEAIKE NGKVIVTGCM GVEEGSIRDV
HPSVLSVTGP QQYEQVVNAV HEVVPPRQDH NPLIDLVPPQ GVKLTPRHYA YLKISEGCNH
SCSFCIIPSM RGKLVSRPVG EVLSEAERLV KAGVKEILVI SQDTSAYGVD VKYKTDFWNG
RPVKTRMLEL CEALSSLGAW VRLHYVYPYP NVDDVIPLMA AGKILPYLDI PFQHASPKVL
KSMKRPAFED RTLARIKNWR EQCPELVIRS TFIVGFPGET EEDFQYLLDW LTEAQLDRVG
CFQYSPVEGA PANDLGLAEV PDDVKQERWD RFMAHQQAIS AARLQLRIGK EIDVLIDEVE
EQGSVGRSFF DAPEIDGSVF IDGDHGFKPG DKVRCRVVDA DEYDMWAEPI
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