Gene PP_1189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1189 
Symbol 
ID1045895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1364777 
End bp1365475 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content66% 
IMG OID637144586 
Producthypothetical protein 
Protein accessionNP_743349 
Protein GI26987924 
COG category[S] Function unknown 
COG ID[COG1720] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00104] probable methyltransferase, YaeB/AF_0241 family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.7243 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCATGC AGCATACGGT TGTCCCGGTC GGCATCGTCC ACTCCTGTTT CAAGGAAAAG 
TTCGCCATTC CGCGCCAGCC GCAACTGGCG CCTGCCGCCT GTGGCGTACT CGAACTGTTG
CCGCCGTTCG ATCAAGGTGA CGCGGTCGAG GGCCTGGAAC AGGTCAGCCA TGTGTGGCTG
CTGTTCCTGT TCCACCAGGC CCTGGAGGAA AAGCCGCGCC TGAAAGTGCG GCCTCCGCGT
CTGGGCGGCA ACAAGAGCAT GGGGGTGTTC GCCACCCGCG CCACCCACCG GCCCAACGGC
ATCGGCCAGT CGGTGGTACG CCTGGAGGGC GTGGAGCCCG GGCGCCTGCT GCTGTCCGGG
ATCGACCTGC TCGACGGCAC GCCGGTGCTG GATATCAAGC CGTATGTGCC CTATGCCGAC
AGCATCGCTG GCGCCAGCAA CCAGATGGCC AACGCAGCGC CGGTGGCAAT TGCCGTGCAG
TGGGCCGACA ACGCCTTGCT CCAGGCCCGC GAGCATGCGC TGCGCCTGAG CGAGCCGCTG
GTGGAGCTAA TCGAGCAATG CCTGGCGCAG GACCCACGGC CGGCCTACCA GATACCACCG
TCCGAGCGGG TGTACGGGGT GAAGTTCTGG GATGTGCAAG TAAGGTGGCA TTACCCGCAG
CCGGACGTCA TCCGGGTGTT GGAAGTGGTA CTGGGCTGA
 
Protein sequence
MAMQHTVVPV GIVHSCFKEK FAIPRQPQLA PAACGVLELL PPFDQGDAVE GLEQVSHVWL 
LFLFHQALEE KPRLKVRPPR LGGNKSMGVF ATRATHRPNG IGQSVVRLEG VEPGRLLLSG
IDLLDGTPVL DIKPYVPYAD SIAGASNQMA NAAPVAIAVQ WADNALLQAR EHALRLSEPL
VELIEQCLAQ DPRPAYQIPP SERVYGVKFW DVQVRWHYPQ PDVIRVLEVV LG