Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1189 |
Symbol | |
ID | 1045895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 1364777 |
End bp | 1365475 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637144586 |
Product | hypothetical protein |
Protein accession | NP_743349 |
Protein GI | 26987924 |
COG category | [S] Function unknown |
COG ID | [COG1720] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00104] probable methyltransferase, YaeB/AF_0241 family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.7243 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCATGC AGCATACGGT TGTCCCGGTC GGCATCGTCC ACTCCTGTTT CAAGGAAAAG TTCGCCATTC CGCGCCAGCC GCAACTGGCG CCTGCCGCCT GTGGCGTACT CGAACTGTTG CCGCCGTTCG ATCAAGGTGA CGCGGTCGAG GGCCTGGAAC AGGTCAGCCA TGTGTGGCTG CTGTTCCTGT TCCACCAGGC CCTGGAGGAA AAGCCGCGCC TGAAAGTGCG GCCTCCGCGT CTGGGCGGCA ACAAGAGCAT GGGGGTGTTC GCCACCCGCG CCACCCACCG GCCCAACGGC ATCGGCCAGT CGGTGGTACG CCTGGAGGGC GTGGAGCCCG GGCGCCTGCT GCTGTCCGGG ATCGACCTGC TCGACGGCAC GCCGGTGCTG GATATCAAGC CGTATGTGCC CTATGCCGAC AGCATCGCTG GCGCCAGCAA CCAGATGGCC AACGCAGCGC CGGTGGCAAT TGCCGTGCAG TGGGCCGACA ACGCCTTGCT CCAGGCCCGC GAGCATGCGC TGCGCCTGAG CGAGCCGCTG GTGGAGCTAA TCGAGCAATG CCTGGCGCAG GACCCACGGC CGGCCTACCA GATACCACCG TCCGAGCGGG TGTACGGGGT GAAGTTCTGG GATGTGCAAG TAAGGTGGCA TTACCCGCAG CCGGACGTCA TCCGGGTGTT GGAAGTGGTA CTGGGCTGA
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Protein sequence | MAMQHTVVPV GIVHSCFKEK FAIPRQPQLA PAACGVLELL PPFDQGDAVE GLEQVSHVWL LFLFHQALEE KPRLKVRPPR LGGNKSMGVF ATRATHRPNG IGQSVVRLEG VEPGRLLLSG IDLLDGTPVL DIKPYVPYAD SIAGASNQMA NAAPVAIAVQ WADNALLQAR EHALRLSEPL VELIEQCLAQ DPRPAYQIPP SERVYGVKFW DVQVRWHYPQ PDVIRVLEVV LG
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