Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1187 |
Symbol | phoQ |
ID | 1045799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 1361609 |
End bp | 1362955 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637144584 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | NP_743347 |
Protein GI | 26987922 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGCT CGCTGCGGGT GCGCCTGATG CTGGCCGCCG CAGTGTTGGC GCTGCTGTTC ATGCTGGCGC TGCTGCCGGC CTTGCAGAAG GCCTTCAGCC TGGCTCTGCA GGAATCGATC GAGCAGCGTC TGGCCTCGGA TGTGACCACG CTGATTTCCG CTGCGCGTAT CGAGCATGGC CGGTTGCAGA TGCCGACACT GCTGCCGGAC GAGCGCTACA ACCTGCCCTA CACAGGCCTG CTCGGCTATA TCTTTGACCG CGATGGCAAA CTGGTCTGGC AGTCGCGTGC CACCGCCGAC CGGCACATCA ACTATCAGCC GCGCTATGAC GGGCGCGGCA ACGAGTTCGA CCGCATTCAC CAGTCAGATG GCGAAGAGTT CTTCGTATAC GACGTCGAGA TAAAGCTGCT GGGCGGGCAG AGCGCCGCCT ACAGCATTGT CGCTCTACAG CCCGTGAGCG AGTACAAGGC CACCCTCAAT GGCCTGCGCG AAAAGCTCTA CCTGGGGTTC GGCGCTGCAT TGCTGGCGCT CATGGTGTTG TTGTGGGCAG GCCTGACCTG GGGGCTGCGC TCGTTGCGAC GCCTCAGCCA CGAACTGGAT GAAGTGGAAT CCGGTGCACG TGACGGCCTG AGCGGCGAGC ACCCACGCGA GTTGCTGCGC CTTACCCGCT CGCTCAACCG TCTGTTGCGC AGTGAGCGTG AGCAGCGCAC GCGCTACCGT GATTCGCTGG ACGACCTGGC GCACAGCCTG AAGACGCCGC TGGCGGTGCT GCAGGGCGTG GGTGAAAGCT TGCAGCAGCG CAGCGGCGAG CGCGAGCAGG CGCGGGTGCT GCAAAGCCAG ATCGAGCGCA TGAGCCAGCA GATCGACTAC CAGCTGCAAC GCGCCAGCCT GCGCAAGAGT GGCCTGGTAC GCCACAGCGT ATTGCTGCGG CCGTTGCTCG ACAGCCTGTG CAGCACCTTG GCCAAGGTTT ACCGGGAAAA ACGTGTGGAC GTGGTGCTGG AGTTGCCGGA CGCGGCGCAG GTACCGATGG AGCAGGGCGC GTTGTTGGAA ATGCTCGGCA ACCTGCTGGA GAACGCCTAC CGGCTGAGCC TGGGCCAAGT GCGGGTGAGC CTGATGAAAG CGCCGGGGTA TCTGACCTTG TGCATCGAGG ACGACGGGCC GGGCGTGCCC GTCGACCAGC GTGAACGCAT TCTGGAGCGT GGGGAGCGGC TGGACAGCCA GCACCCGGGG CAGGGCATCG GCTTGGCAGT GGTCAAGGAT ATCGTCGACA GCTATGACGC CGAGCTGAGC CTTGGCGATT CGCCACTGGG GGGCGCTGCG TTCAGGATCA CCTTCCACCT GGATTGA
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Protein sequence | MIRSLRVRLM LAAAVLALLF MLALLPALQK AFSLALQESI EQRLASDVTT LISAARIEHG RLQMPTLLPD ERYNLPYTGL LGYIFDRDGK LVWQSRATAD RHINYQPRYD GRGNEFDRIH QSDGEEFFVY DVEIKLLGGQ SAAYSIVALQ PVSEYKATLN GLREKLYLGF GAALLALMVL LWAGLTWGLR SLRRLSHELD EVESGARDGL SGEHPRELLR LTRSLNRLLR SEREQRTRYR DSLDDLAHSL KTPLAVLQGV GESLQQRSGE REQARVLQSQ IERMSQQIDY QLQRASLRKS GLVRHSVLLR PLLDSLCSTL AKVYREKRVD VVLELPDAAQ VPMEQGALLE MLGNLLENAY RLSLGQVRVS LMKAPGYLTL CIEDDGPGVP VDQRERILER GERLDSQHPG QGIGLAVVKD IVDSYDAELS LGDSPLGGAA FRITFHLD
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