Gene PP_1187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1187 
SymbolphoQ 
ID1045799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1361609 
End bp1362955 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content64% 
IMG OID637144584 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionNP_743347 
Protein GI26987922 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGCT CGCTGCGGGT GCGCCTGATG CTGGCCGCCG CAGTGTTGGC GCTGCTGTTC 
ATGCTGGCGC TGCTGCCGGC CTTGCAGAAG GCCTTCAGCC TGGCTCTGCA GGAATCGATC
GAGCAGCGTC TGGCCTCGGA TGTGACCACG CTGATTTCCG CTGCGCGTAT CGAGCATGGC
CGGTTGCAGA TGCCGACACT GCTGCCGGAC GAGCGCTACA ACCTGCCCTA CACAGGCCTG
CTCGGCTATA TCTTTGACCG CGATGGCAAA CTGGTCTGGC AGTCGCGTGC CACCGCCGAC
CGGCACATCA ACTATCAGCC GCGCTATGAC GGGCGCGGCA ACGAGTTCGA CCGCATTCAC
CAGTCAGATG GCGAAGAGTT CTTCGTATAC GACGTCGAGA TAAAGCTGCT GGGCGGGCAG
AGCGCCGCCT ACAGCATTGT CGCTCTACAG CCCGTGAGCG AGTACAAGGC CACCCTCAAT
GGCCTGCGCG AAAAGCTCTA CCTGGGGTTC GGCGCTGCAT TGCTGGCGCT CATGGTGTTG
TTGTGGGCAG GCCTGACCTG GGGGCTGCGC TCGTTGCGAC GCCTCAGCCA CGAACTGGAT
GAAGTGGAAT CCGGTGCACG TGACGGCCTG AGCGGCGAGC ACCCACGCGA GTTGCTGCGC
CTTACCCGCT CGCTCAACCG TCTGTTGCGC AGTGAGCGTG AGCAGCGCAC GCGCTACCGT
GATTCGCTGG ACGACCTGGC GCACAGCCTG AAGACGCCGC TGGCGGTGCT GCAGGGCGTG
GGTGAAAGCT TGCAGCAGCG CAGCGGCGAG CGCGAGCAGG CGCGGGTGCT GCAAAGCCAG
ATCGAGCGCA TGAGCCAGCA GATCGACTAC CAGCTGCAAC GCGCCAGCCT GCGCAAGAGT
GGCCTGGTAC GCCACAGCGT ATTGCTGCGG CCGTTGCTCG ACAGCCTGTG CAGCACCTTG
GCCAAGGTTT ACCGGGAAAA ACGTGTGGAC GTGGTGCTGG AGTTGCCGGA CGCGGCGCAG
GTACCGATGG AGCAGGGCGC GTTGTTGGAA ATGCTCGGCA ACCTGCTGGA GAACGCCTAC
CGGCTGAGCC TGGGCCAAGT GCGGGTGAGC CTGATGAAAG CGCCGGGGTA TCTGACCTTG
TGCATCGAGG ACGACGGGCC GGGCGTGCCC GTCGACCAGC GTGAACGCAT TCTGGAGCGT
GGGGAGCGGC TGGACAGCCA GCACCCGGGG CAGGGCATCG GCTTGGCAGT GGTCAAGGAT
ATCGTCGACA GCTATGACGC CGAGCTGAGC CTTGGCGATT CGCCACTGGG GGGCGCTGCG
TTCAGGATCA CCTTCCACCT GGATTGA
 
Protein sequence
MIRSLRVRLM LAAAVLALLF MLALLPALQK AFSLALQESI EQRLASDVTT LISAARIEHG 
RLQMPTLLPD ERYNLPYTGL LGYIFDRDGK LVWQSRATAD RHINYQPRYD GRGNEFDRIH
QSDGEEFFVY DVEIKLLGGQ SAAYSIVALQ PVSEYKATLN GLREKLYLGF GAALLALMVL
LWAGLTWGLR SLRRLSHELD EVESGARDGL SGEHPRELLR LTRSLNRLLR SEREQRTRYR
DSLDDLAHSL KTPLAVLQGV GESLQQRSGE REQARVLQSQ IERMSQQIDY QLQRASLRKS
GLVRHSVLLR PLLDSLCSTL AKVYREKRVD VVLELPDAAQ VPMEQGALLE MLGNLLENAY
RLSLGQVRVS LMKAPGYLTL CIEDDGPGVP VDQRERILER GERLDSQHPG QGIGLAVVKD
IVDSYDAELS LGDSPLGGAA FRITFHLD