Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1185 |
Symbol | oprH |
ID | 1045841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 1360133 |
End bp | 1360738 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637144582 |
Product | outer membrane protein H1 |
Protein accession | NP_743345 |
Protein GI | 26987920 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.247774 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACCT TCAATACCCT GCTTGCCGCC ATGGCCGTCT GTGCCGCTGG CATCACCACC GCCCAGGCCG CGGACGACAA CTTCGCCAGC CTCACCTACG GCCAGACCAG CGACAAAGTC CGCAAGTCCG GCCTGCTGCA ACGCAACACC GACCACCTCA ACGCCGACGG TATCATCGGC AAGGACGATA CCTGGGGTGT GCGTCTGGGC AAGATCAACG ACCAGGGCCG CTACTACATG ACCTATGACA ACGTCTCTGG CGACCACAGT GGCCTGAAGT TGCGCCAGGA AAACCTGCTT GGCAGCTACG ACTTGTTCCT GCCGGTGGGC GATACCACCA AGCTGTTCGG TGGTGGCAGC CTGGGTGTGA CCAAACTGAC CCAGGACTCG CCAGGCGCCA GCCGGGACAC TGACTACGGT TATGCCTACG GCTTGCAGGC CGGTGTGATC CAGGACATCA CCGACAAGGC CTCGGTCGAA CTGGGCTACC GTTACCTGCG CACCAATGCC GCGACCGAGG TGGGCGCACA TGGCGGGCCG AAGGACGGCA CCCTGCGTCT GACCAGCAGC GCCCAGACCT ACCTGGCGGC TTCATACAAG TTCTGA
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Protein sequence | MKTFNTLLAA MAVCAAGITT AQAADDNFAS LTYGQTSDKV RKSGLLQRNT DHLNADGIIG KDDTWGVRLG KINDQGRYYM TYDNVSGDHS GLKLRQENLL GSYDLFLPVG DTTKLFGGGS LGVTKLTQDS PGASRDTDYG YAYGLQAGVI QDITDKASVE LGYRYLRTNA ATEVGAHGGP KDGTLRLTSS AQTYLAASYK F
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