Gene PP_1184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1184 
Symbol 
ID1045881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1359212 
End bp1360009 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content62% 
IMG OID637144581 
Productdienelactone hydrolase 
Protein accessionNP_743344 
Protein GI26987919 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00788305 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACATGC GAGCCCTGCT GGCCCTGACC CTGATGTGCA GCGCCGCCCT CGCCCAAGCG 
GCGGTAGTGA CCCGTGAAAT TCCGTATCAG GACGACGATG GCAACCGCCT CGTCGGCTAC
TACGCCTACG ATGACGCGCT GGACGGCAAA CGCCCAGGCA TCGTTGTGGT GCATGAATGG
TGGGGCCTGA ACGACTATGC CAAGCGTCGT GCGAGAGATC TCGCCGCCCT GGGCTACAAG
GCACTGGCCA TCGACATGTA CGGCGATGGC AAGCACACCG AGCATCCGCA GGATGCCCAG
GCATTCATGG CCGCAGCGAT GAAGGACCCG GCCGCAGCAG CAGCGCGCTT CGACGCGGGC
CTGGAGTTGT TGAAGAAGCA GCCGAATGTG AACAAGCATC AACTGGGCGC TGTCGGCTAC
TGTTTTGGCG GCAAGGTGGT GCTCGATGCC GCACGCCGGG GAGAAAAGCT CGATGGCGTG
GTGAGCTTCC ATGGCGCACT GGCCACCCAG ACCCCGGCAA AACCTGGCGT GGTGCGGGCC
GATATCCTGG TCGAGCATGG TGCGGCGGAC AGCATGGTCA CCCCACAGCA GGTGGAGGCA
TTTAAGGCCG AGATGGATGC GGCCAAGGTC AACTACCAGT TCGTCAGTAT TGAAGGGGCC
AAGCACGGGT TCACCAACCC CGATGCCGAT CGGCTGAGCC ACGGTGAACA TGGGGGGCCG
GACATTGGCT ATAACAAGGC AGCGGACGAG CGTTCCTGGG CAGATATGCA GGCGTTCTTC
AAGAAGGTGT TCAAATAA
 
Protein sequence
MNMRALLALT LMCSAALAQA AVVTREIPYQ DDDGNRLVGY YAYDDALDGK RPGIVVVHEW 
WGLNDYAKRR ARDLAALGYK ALAIDMYGDG KHTEHPQDAQ AFMAAAMKDP AAAAARFDAG
LELLKKQPNV NKHQLGAVGY CFGGKVVLDA ARRGEKLDGV VSFHGALATQ TPAKPGVVRA
DILVEHGAAD SMVTPQQVEA FKAEMDAAKV NYQFVSIEGA KHGFTNPDAD RLSHGEHGGP
DIGYNKAADE RSWADMQAFF KKVFK