Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1182 |
Symbol | |
ID | 1045871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 1356818 |
End bp | 1358425 |
Gene Length | 1608 bp |
Protein Length | 535 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637144579 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | NP_743342 |
Protein GI | 26987917 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.955625 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAATT CGATCTTCCT GCGCATCTAC GGCGGCATGC TGGCCGTGCT GGTGCTGGTG GCCCTGCTTG GCGTGCTCAG CCTGCACCTG GTCAACGAAG TGCGCGCTGC CCAGCACCGC GAGGGCCTGG CCCAGGGCAC TTTCAGCCTG ATGGCCGACA ACCTGGCAAT GCAGAATGAA ACCCAACGCA AGCGTTCGCT GCTGATCTGG GAACGCCTGC TTGGCGTGCA GTTGGCGCTG CAGCCGATGA GCGCACGCAG CCTTGACGGT GGCCAGCGGG CGCGCCTGTA CCGTGGCCTG GTGGTGGTCG AGAAGATTGG CCCGCATGCG GCGCAAGTGC TACGCAAGGT GGGCCAGGAA GACCTGATGC TGGTCGCGCA GATCAAACAG ATCAGCGAGC AGTTGGCGCG GGCCACCCTC TATCTATTGG CCGACGAATT GGTGCGCTAC CCGGTAGCCG AACAGCAGCA GCGTCTGGCA CAGATCAAGC AGGAAAAAGG CTTCGGCTTT GGCGTTGCCT TGCAACGTAT CGAGCGGGTC AGCCTGGACG ATGACCAGCG GCGCCGGGTG GAGGAGGGCG ACACGGTGAT GGCGCTGGGC AAGGATGGTG ACTCGATCCG GGTGTTCGCC GGGCTGACGG GCTCGCCATG GGTACTGGAA ATCGGCCCGC TGTACCAGCT CAACCCTTAC CCGCCGCAGT TGCTGATCCT GATTGCCTTC CTGGGGCTGT GCCTGATCGG CCTGGTGGTC TACCTGCTGG TGCGTCAGCT GGAACGTCGT GTGTCGGGCC TGGAGATTGC TGCCACGCGC ATCGCCCAGG GCAGCCTGGA CACCCGCGTG CCGGCCGGCG ACGCCGACTC GGTAGGGCGC CTGGCTGCTG CCTTCAATGG CATGGCCGAG CACCTGCAGC GCTCGCTGAC CATGCAGCGC GAGCTGGTGC GAGCGGTGTC CCACGAGCTT CGCACGCCGG TGGCGCGCCT GCGCTTTGGC TTGGAGATGA TCGAAAGCGC CACGACTGAA CAGGTGCGGG CTAAGCATCT GGCGGGCATG GACGGGGATA TTCAGGACCT CGACAAGCTG GTCGACGAGA TGCTGACCTA CGCCCGCCTG GAGCAGGGCG CACCGGCCTT GAAGTTCCAG CGGGTCGATC TGGATGCCTT GCTCGATCGG GTGATCGAAG AGCTGGCACC TTTGCGTGCC GAGGTGCGGG TTGTGCGCGG CGACTGCCAG GGCGCGGATG CCGAAGGCGC CTGGGTCGAG GCCGAGCCGC GCTACTTGCA CCGGGCCCTG CAGAACCTTG TCGGCAATGC CATGCGCCAT GCCGAGGGCG AAGTGCGCCT GAGCTATCAG CTGGGCCAGC AACGTTGCCG TATCGATGTG GAGGATGACG GCCCGGGGAT CCCCGAGGGC TTCTGGGACC GCATCTTCAC GCCCTTCACC CGCCTCGATG ACAGCCGTAC CCGTGCCTCG GGCGGGCACG GGTTGGGCTT GTCGATCGTA CGGCGGATCA TCTACTGGCA CGCGGGCCGG GCCACAGTGG GCCGCAGCGA GGCGTTGGGC GGTGCCTGCT TCAGCCTGAA CTGGCCAAGG CAGCAGGCAC CGCTGTAA
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Protein sequence | MNNSIFLRIY GGMLAVLVLV ALLGVLSLHL VNEVRAAQHR EGLAQGTFSL MADNLAMQNE TQRKRSLLIW ERLLGVQLAL QPMSARSLDG GQRARLYRGL VVVEKIGPHA AQVLRKVGQE DLMLVAQIKQ ISEQLARATL YLLADELVRY PVAEQQQRLA QIKQEKGFGF GVALQRIERV SLDDDQRRRV EEGDTVMALG KDGDSIRVFA GLTGSPWVLE IGPLYQLNPY PPQLLILIAF LGLCLIGLVV YLLVRQLERR VSGLEIAATR IAQGSLDTRV PAGDADSVGR LAAAFNGMAE HLQRSLTMQR ELVRAVSHEL RTPVARLRFG LEMIESATTE QVRAKHLAGM DGDIQDLDKL VDEMLTYARL EQGAPALKFQ RVDLDALLDR VIEELAPLRA EVRVVRGDCQ GADAEGAWVE AEPRYLHRAL QNLVGNAMRH AEGEVRLSYQ LGQQRCRIDV EDDGPGIPEG FWDRIFTPFT RLDDSRTRAS GGHGLGLSIV RRIIYWHAGR ATVGRSEALG GACFSLNWPR QQAPL
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