| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1173 |
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| Symbol | |
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| ID | 1045751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 1347294 |
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| End bp | 1348532 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637144570 |
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| Product | porin, putative |
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| Protein accession | NP_743333 |
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| Protein GI | 26987908 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.121205 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.068345 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCT GCCACACCCT GCCCTTCGCC CTGCTTGGCG CCGGGGTTAT CGCCGGCCTG
CCGGGCACCA GCCTGGCCGC GGGATTTGTC GAGGACGGCA AGGCCACCCT CGGGCTGCGC
AACTTCTACA TCAATCGAAA CTTCACCAAC CCCAGCAACC CGCAAAGCAA GGCCGAGGAG
TGGACGCAAA GCTTCATCCT CGACGCCCGC TCGGGGTTCA CAGAAGGGCC AATCGGCTTC
GGCGTGGATG TGCTGGGGCT GTGGTCGGTC AAGCTCGACG GTGGTGGCGG CACTTATGGT
ACGGCGTTGC TGCCACGCCA TGACGATGGC CGGCCAGCCG ACGATTACGG GCGCCTGGCA
GTGGCGGGTA AGGCGCGTAT TTCCAAGACC GAACTGAAGA TCGGTGAATG GATGCCGGTG
CTGCCGATTC TGCGTTCGGA CGACGGGCGT TCGTTGCCGC AAACATTCCG TGGCGGGCAG
GTGACCTCCA ACGAAATCGC AGGGCTGACC CTGTACGGCG GCCAGTTCCG CGGCAACAGC
CCGCGTAACG ACGCGAGCAT GGAAGACATG AGCTACGGCG GCGGTGTGTC GGACCGTTTC
AACTTCGTCG GCGGCGAGTA CAAGTTCAAC CAGGACCGCA CGCAGGTGGG GCTTTGGAAT
GCGGTGCTGA AGGACGTGTA CCAGCAGCAA TACCTGCAAC TGAGCCACAG CCAGCCGGTG
GGTGACTGGA CCCTGGGTGC GAACCTGGGC TACTTCCATG GCGACGAGGA CGGCTCCGAA
CGTGCCGGGC AGCTGGACAA CAAGACCTAC TCGGGGATGT TCTCGGCCAA GTACGGCGGC
AGCACCTTCT GGGTGGGGCT GCAGAAAGTC GATGGTGATA CCTGGATGCG GGTGAACGGC
ACCAGTGGCG GGACCTTGGC CAACGACAGT TACAACTCCA GCTTCGACAA TGCCAACGAG
CGTTCGTGGC AGGTGCGCCA TGACTTCAAC TTCGTCACCG TCGGGGTACC GGGGTTGACC
CTGATGAACC GCTACATCAG CGGGCGCGAT GTGCACAGCG GGGGCGTGAC CGATGGCAAG
GAGTGGGTGC GTGAAACGGA GCTTGCGTAT GTGATCCAGA GCGGGGCGTT CAAGGATTTA
AGCGTGAAAT GGCGTAACTC GTCGATTCGC CGGGATTACA GCAATAACGA GTTCGATGAG
AACCGGTTGA TCTTCAACTA TCCGCTGTCG TTGCTCTGA
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| Protein sequence | MKICHTLPFA LLGAGVIAGL PGTSLAAGFV EDGKATLGLR NFYINRNFTN PSNPQSKAEE
WTQSFILDAR SGFTEGPIGF GVDVLGLWSV KLDGGGGTYG TALLPRHDDG RPADDYGRLA
VAGKARISKT ELKIGEWMPV LPILRSDDGR SLPQTFRGGQ VTSNEIAGLT LYGGQFRGNS
PRNDASMEDM SYGGGVSDRF NFVGGEYKFN QDRTQVGLWN AVLKDVYQQQ YLQLSHSQPV
GDWTLGANLG YFHGDEDGSE RAGQLDNKTY SGMFSAKYGG STFWVGLQKV DGDTWMRVNG
TSGGTLANDS YNSSFDNANE RSWQVRHDFN FVTVGVPGLT LMNRYISGRD VHSGGVTDGK
EWVRETELAY VIQSGAFKDL SVKWRNSSIR RDYSNNEFDE NRLIFNYPLS LL
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