Gene PP_1171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1171 
Symbol 
ID1045739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1346084 
End bp1346890 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content64% 
IMG OID637144568 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionNP_743331 
Protein GI26987906 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.132955 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0662114 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACTA CCCCCTTCAA TCGCCTGCTG CTCACCGGAG CCGCAGGCGG CCTGGGCAAG 
GTCCTTCGCG AACGCCTGAA AGGCTACGCC GAGGTCCTGC GCCTGTCTGA CATCAGCCCC
ATGGCCCCGG CCGCGGGCCC GCATGAAGAA GTCATTACCT GTGACCTGGC CGACAAGGCT
GCGGTGCATA CCCTGGTCGA GGGCGTAGAC GCCATCATCC ACTTTGGCGG GGTTTCTACC
GAACACGCCT TCGAAGAGAT TCTCGGCCCC AATATCTGCG GCGTGTTCCA CGTGTACGAG
GCGGCGCGCA AGCACGGGGT CAAGCGCATC ATCTTCGCCA GCTCCAACCA CACCATCGGT
TTCTATCGCC AGGATGAGCG CATCGACGCT CACGCGCCGC GCCGGCCCGA CAGCTATTAC
GGGCTGTCCA AGTGCTACGG CGAAGATGTG GCCAGCTTCT ACTTTGACCG CTACGGCATC
GAGACCGTCA GCATTCGCAT CGGCTCGTCG TTCCCGCAGC CACAGAACCT GCGCATGCTC
TGCACCTGGC TCAGTTACGA CGACCTGGTG CAGTTGATCG AACGCGGGCT GTTCACCCCC
GGGGTTGGCC ACACCATCGT CTACGGCGCC TCCGACAATC GCACCGTGTG GTGGGACAAC
CGCCATGCCG CGCACCTGGG CTATGTACCC AAGGACAGCT CCGAAACCTT CCGCGCAGCC
GTGGAGGCCC AACCGGCACC CGCCGCCGAT GACCCGAGCA TGGTCTACCA GGGCGGCGCT
TTCGCCGTGG CCGGCCCGTT CAACTGA
 
Protein sequence
MTTTPFNRLL LTGAAGGLGK VLRERLKGYA EVLRLSDISP MAPAAGPHEE VITCDLADKA 
AVHTLVEGVD AIIHFGGVST EHAFEEILGP NICGVFHVYE AARKHGVKRI IFASSNHTIG
FYRQDERIDA HAPRRPDSYY GLSKCYGEDV ASFYFDRYGI ETVSIRIGSS FPQPQNLRML
CTWLSYDDLV QLIERGLFTP GVGHTIVYGA SDNRTVWWDN RHAAHLGYVP KDSSETFRAA
VEAQPAPAAD DPSMVYQGGA FAVAGPFN