| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1170 |
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| Symbol | |
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| ID | 1045777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 1345180 |
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| End bp | 1346061 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637144567 |
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| Product | SMP-30/gluconolaconase/LRE domain protein |
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| Protein accession | NP_743330 |
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| Protein GI | 26987905 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3386] Gluconolactonase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.482172 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0648021 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTGCG AACTGATCGT CGACGCCCGC AACGGTACCG GCGAAAGCCC TGTGTGGCAC
CCCGGTGAAC AGGCCCTGTA CTGGGTAGAC ATTCCCGCTC GCCAATTGCA TCGCTGGCAA
GCGGCCGATG GCAAACACCA GTGCTGGCAG GGCGACGAGA TGCTGGCCTG CATCGCCCGC
AGCGGTCAGG GCTGGGTTGC GGGCATGGAA AGCGGCATTT TCCAGCTCCA GGCCAAGGCG
GACGGCAGCC TGGACAGCCG GCTGCTCAGC AACGTGCAGC ACGCCCAGGC CGGCATGCGC
TTCAACGATG GCCGCTGCGA CCGTCAGGGC CGCTTCTGGG CCGGGACCAT GCTGCTGGAC
ATGCAGCAAG GCGCCCATGT GGGTGCGCTG TACCGGCATG ACGGCGAAGG CCACCTGCAC
CTGCAGCAGG ACGGCATGAT CGTGCCCAAT GGCCTGGCGT TCAGCCCCGA CGGCAAGCGC
ATGTACCTGT CCGACTCGCA CCCGAACGTG CAGAAGGTAT GGGCTTTCGA CTACGACACC
GACAGCGGCA CACCGCACGG CAAGCACCTG TTCGTCGACA TGCGCAACTA CCCCGGCCGC
CCGGATGGCG CCGCCATCGA CCAGGACGGC TGCTACTGGA TCTGCGGCAA CGACGCCGGG
CAGATCCACC GTTTTACCCC CGAAGGTCGC CTCGACCGAT CACTCAGCGT GCCGGTGAAA
AAGCCGGCAA TGTGCGCCTT TGGCGGCGCC AGCCTGGACA TTCTGTACGT CACCTCGATC
CGCCCCACGG GCATCGACCT CAGCGACCAG CCCCTGGCTG GCGGGGTATT TGCCCTCGAC
CCTGGCACCA AGGGCCTGGA GGAACCTGCC TACCGGGGCT GA
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| Protein sequence | MNCELIVDAR NGTGESPVWH PGEQALYWVD IPARQLHRWQ AADGKHQCWQ GDEMLACIAR
SGQGWVAGME SGIFQLQAKA DGSLDSRLLS NVQHAQAGMR FNDGRCDRQG RFWAGTMLLD
MQQGAHVGAL YRHDGEGHLH LQQDGMIVPN GLAFSPDGKR MYLSDSHPNV QKVWAFDYDT
DSGTPHGKHL FVDMRNYPGR PDGAAIDQDG CYWICGNDAG QIHRFTPEGR LDRSLSVPVK
KPAMCAFGGA SLDILYVTSI RPTGIDLSDQ PLAGGVFALD PGTKGLEEPA YRG
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