| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1169 |
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| Symbol | dctP |
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| ID | 1045711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 1344144 |
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| End bp | 1345115 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637144566 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | NP_743329 |
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| Protein GI | 26987904 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.061723 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTTCA AACGCAAGCT GCTTCTTGCC GTACTCCCGT TCGCCTTCAG CGTGGCCATG
CCCGCCTCGG CACTGGACAT CAAGTTCGCC GAGATTCACC CGGCCGGGTA CCCGACCGTG
GTCGCCGAAC AGAACATGGG TAAAAAGCTG GAAGACGCCA GCAATGGCGA AATCACCTTC
AAGATGTTCG CCGGCGGCGT TCTGGGTTCT GAGAAGGAAG TGATCGAACA GGCACAGATC
GGTGCCGTGC AGATGACCCG TGTCAGCTTG GGGATCGTCG GCCCGGTGGT GCCGGATGTG
AACGTATTCA ACATGCCGTT CGTGTTCCGC GACCATGATC ACATGCGCAA GATCATCGAC
GGCGAGATCG GCCAGGAAAT CCTCGACAAG ATCACCAATT CCGATTTCAA CCTGGTGGCC
CTGGCCTGGA TGGATGGCGG CTCGCGCAGC ATCTACACGA AAAAGCCGGT GCGCAGCCTG
GAAGACCTCA AGGGCATGAA GATTCGCGTA CAGGGCAACC CGCTGTTCAT CGACATGATG
AACGCCATGG GCGGCAACGG CATCGCCATG GACACCGGGG AAATCTTCAG CGCCCTGCAG
ACTGGCGTGA TCGATGGCGC CGAAAACAAT CCGCCCACGC TGCTTGAGCA CAACCACTTC
CAGAGCGCCA AGTACTACAC ACTCACGGGT CACCTGATCC TCCCGGAGCC GGTAGTGATG
TCCAAGACCA CCTGGAACAA GCTCAGCCCC GAGCAGCAGG CGCTGGTGAA GAAGGTTGCG
CGTGAAGCAC AGATGGAAGA GCGCGCGCTG TGGGACGCCA AGTCTGCCGC CAGCGAAGAG
AAGCTCAAGG CCGCCGGTGT CGAGTTCATT ACCGTCGACA AGAAGCCGTT CTACGACGCC
ACGGCTTCGG TACGCGAAAA ATACGGCGCG CAGTACGCCG ACCTGATGAA GCGTATCGAC
GCCGTCCAGT AA
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| Protein sequence | MTFKRKLLLA VLPFAFSVAM PASALDIKFA EIHPAGYPTV VAEQNMGKKL EDASNGEITF
KMFAGGVLGS EKEVIEQAQI GAVQMTRVSL GIVGPVVPDV NVFNMPFVFR DHDHMRKIID
GEIGQEILDK ITNSDFNLVA LAWMDGGSRS IYTKKPVRSL EDLKGMKIRV QGNPLFIDMM
NAMGGNGIAM DTGEIFSALQ TGVIDGAENN PPTLLEHNHF QSAKYYTLTG HLILPEPVVM
SKTTWNKLSP EQQALVKKVA REAQMEERAL WDAKSAASEE KLKAAGVEFI TVDKKPFYDA
TASVREKYGA QYADLMKRID AVQ
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