| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1168 |
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| Symbol | |
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| ID | 1045721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 1343550 |
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| End bp | 1344077 |
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| Gene Length | 528 bp |
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| Protein Length | 175 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637144565 |
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| Product | TRAP dicarboxylate transporter, DctQ subunit, putative |
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| Protein accession | NP_743328 |
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| Protein GI | 161378138 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.361729 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0264613 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCGC TTTTCCTGAG CGTGAACGAC ACGCTGTACC GCAGTTGCAT CTGGATCGCG
GGCCTGTCGA TCCTGGCCAT GACGCTGATC ATCCCGTGGG GCATCTTCGC CCGCTACGTG
CTGGGCACCG GCTCCAGCTG GCCAGAACCA GTCTCTATCC TTCTGATGGT GGTATTCACC
TTCGTTGGTG CCGCCGCCAG CTATCGCGCC GGGGCGCATA TGGCGGTTGG GATGATTACC
GACCGGTTGC CGCCGCTGCA GCGCCAGCTG GTCGCCCTGC TGGTTCAACT GCTGATGATC
GTGGTGTGCG TGTTCATGAC CTATTACGGC ACCCGGCTGT GCATCACCAC CTGGAACCAG
TCGCTGGCCT CGCTGCCCGG CGTGCGGGTC GGCATGACCT ACGCGCCGAT CCCGGTCGGC
GGCGTACTGA CGCTGGTGTT CGTGCTGGAA AAACTCCTGC TGGGCGATCA GAGCAACCGC
AAGGTCGTGC GCTTTGATCT GGTCGAAGAA AACGAAGGAG CTGCGTAA
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| Protein sequence | MKSLFLSVND TLYRSCIWIA GLSILAMTLI IPWGIFARYV LGTGSSWPEP VSILLMVVFT
FVGAAASYRA GAHMAVGMIT DRLPPLQRQL VALLVQLLMI VVCVFMTYYG TRLCITTWNQ
SLASLPGVRV GMTYAPIPVG GVLTLVFVLE KLLLGDQSNR KVVRFDLVEE NEGAA
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