Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1162 |
Symbol | |
ID | 1045699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 1336626 |
End bp | 1337255 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637144559 |
Product | glutathione S-transferase family protein |
Protein accession | NP_743322 |
Protein GI | 26987897 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0102114 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAACC CGATCAAGCT CTACAACTTC CCCAAGTCTG GCCACGCCCA TCGCATCGAG TTGATGCTCT CGCTACTGAA CCTGCCCACC GAGCTGGTGT TCGTCGATCT GGCCAAAGGC GCGCACAAGC AGCCGGACTT CCTCGCCCTC AACCCATTCG GCCAGGTTCC AGTCATCGAT GACAACGGCA CCGTGATTGC CGACTCCAAC GCCATCCTCG TCTACCTGGC CAAAAAGTAT GACAACGGTA CCTGGCTGCC CGAAGAACCT GCCGCCGCCG CCCGGGTGCA ACGCTGGCTA TCGGTCGCCG CAGGCCCGCT GGCCTTTGGC CCGGCAGCCG CTCGCCTGGT CACGGTGTTC GGGGCTTCGT TCAATACCGA CGAAGTGATT TCCCGCGCCC ACACCTTGCT CAAGGTGATC GATGCCGAGT TGGCCAATAC GCCATTCCTG ACGGGCAGCA CACCCACCAT AGCGGACATT GCCAACTACT CGTACATCGC TCACGCCCCC GAAGGCAACG TGTCGCTGGA GCCCTATGCC AATGTGCGCA ACTGGCTGGC GCGGATCGAG GCGCTGCCGC GTTTCGTCCC CATGCCGCGC ACCGTGATCG GGCTGCAAAC CCACGCCTGA
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Protein sequence | MSNPIKLYNF PKSGHAHRIE LMLSLLNLPT ELVFVDLAKG AHKQPDFLAL NPFGQVPVID DNGTVIADSN AILVYLAKKY DNGTWLPEEP AAAARVQRWL SVAAGPLAFG PAAARLVTVF GASFNTDEVI SRAHTLLKVI DAELANTPFL TGSTPTIADI ANYSYIAHAP EGNVSLEPYA NVRNWLARIE ALPRFVPMPR TVIGLQTHA
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