| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1152 |
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| Symbol | |
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| ID | 1045482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 1318775 |
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| End bp | 1319644 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637144547 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | NP_743313 |
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| Protein GI | 26987888 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.633173 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.115972 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGCGG CCGTACGTAT TCTGGTGACC CTGTGTGTGG TGGCCCTGGC CGTGTTGGCC
GGCTACCAGC TGTGGCAGTA CTACATGCTC ACCCCATGGA CGCGTGATGC CCGTGTGCGC
GCCGATGTGG TGGTGATTGC GCCTGATGTG TCCGGCTGGG TTCGCGAACT CAAGGTCCAT
GACAACCAGC AGGTCAAGGC TGGCGACTTG TTGATGAGTA TTGACCGCGA GCGCTTCCAG
GCCGCGCTCG ATCAGGCCAG CGCGGTGACC GAGACACGCG CCCAGCAACT GCGCTTGCGC
GAGCGTGAAG CAGCCCGGCG TACTGCCCTG GGGCCAGAGG CGATCAGTGC CGAGTTGCGT
GAAAACGCCC AGATCAATGC CGCCATCGCG CGTGGCGAGC TGCATGAAGC CGAGGCGCAG
TTGCAGGTGG CCAGGATCAA CCTGGCGCGC AGTGAAGTGC GGGCCCCGCG CAGCGGGCAT
ATCACCAATC TGCGTCTGGC CGAGGGCAAT TATGTGAACA CCGGGGAATC GGTGATGGCG
CTGGTGGATG ATTCGACGTT CTACATCCAG GCCTATTTCG AGGAAACCAA GTTGCCGCGC
ATTCGCGTTG GGGACACTGT GAAGGTGTGG CTGATGGGCA CGGGTGAACC GATGCAGGGG
CACGTGGAGA GCATCAGCCG CGGCATCACC GACCGCAACA GCAACCCGGA CAGCCAGTTG
CTGCCGGAGG TAGAGCCGAC CTTCAACTGG GTGCGACTGG CCCAGCGCAT ACCGGTGAGG
ATTCGCCTGG ATCAGGTGCC GGAAGGGCTG ACCTTGAGTG CGGGGATGAC GGCGAGTGTG
CAAGTGCACG AGGACCGCGA GCCGCAGTGA
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| Protein sequence | MRAAVRILVT LCVVALAVLA GYQLWQYYML TPWTRDARVR ADVVVIAPDV SGWVRELKVH
DNQQVKAGDL LMSIDRERFQ AALDQASAVT ETRAQQLRLR EREAARRTAL GPEAISAELR
ENAQINAAIA RGELHEAEAQ LQVARINLAR SEVRAPRSGH ITNLRLAEGN YVNTGESVMA
LVDDSTFYIQ AYFEETKLPR IRVGDTVKVW LMGTGEPMQG HVESISRGIT DRNSNPDSQL
LPEVEPTFNW VRLAQRIPVR IRLDQVPEGL TLSAGMTASV QVHEDREPQ
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