Gene PP_1150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1150 
Symbol 
ID1045675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1316581 
End bp1318569 
Gene Length1989 bp 
Protein Length662 aa 
Translation table11 
GC content66% 
IMG OID637144545 
Productfusaric acid resistance protein region 
Protein accessionNP_743311 
Protein GI26987886 
COG category[S] Function unknown 
COG ID[COG1289] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0139844 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.271992 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCATCA CCTTTCAGGC CCTGTTCGCG CCCAGCAGCC TCGCCCTCAA GTTTGCCATC 
AAGACCCTGC TCGGGGGCGG CCTGGCGTTG TGGCTGGCGA TGCGCTGGGG GCTGGAGCAA
CCCTCCTGGG CATTGATGAC TGCTTTCATC GTCGCCCAGC CGCTATCGGG CATGGTGGTG
CAGAAAGGCT TGGCGCGGTT GGCCGGCACG TTGGTCGGCA CAGTCATGTC GGTGCTGTTC
ATCGGCCTGT TCGCCCAGAC CCCCGGCCTG TTTCTGCTTA CCTTGGCGCT TTGGCTGGCG
CTGTGTACCG CAGCGTCCAC CCAGTTGCGC AGCGCCTGGG CCTATGCCTT CGTGCTGGCC
GGCTACACCG CAGCGATCAT CGCCTTGCCG GCCATTGACC ACCCCCTGCA AGTATTCGAC
CAGGCCGTGG CTCGCTGTAC CGAGATCTGC CTGGGTATTT TCTGTGCAAC AGCCAGCAGT
GCCTTGCTCT GGCCCATGCG GGTCGAGCAG CAACTGGGCG GGCAGGCGCG GCAGGCCTGG
CAGAACGGCC TGCAGGCCGC CAGCGCCATG CTGGGCGGAG AGGACGAGGC GCGCAAAGGC
CTGCTGGAAA GCCTGGGGCG CATCGTTGCC ATCGACAGCC AACGTGAACA TGCCTGGTTC
GAGGGCAATC GCGGGCGCCA ACGTGCCCGT GCCATTCGTG GCCTTAGCCA GAAACTGATG
GTGCTGTTGC GTATTTCCCG TTCGGTGCGC CGCCAGTGGC GGCAACTGGA TGAGGGTGAG
GTAGAGCATC TGACGCCCTG GTTGCAGGAA GTGCGCACGC TGCTGGCCCA ACCCGATCAG
CCCAGCCTGC TGTTGTTGCG TCAGCGAATC TGGGATGCCG CCCACGATGA GCAAATCAGT
TCAGCGGAGC ACTTCTGCCT GGCGCGCATG GCCCTGCTAT TGGACTATGC CATGGCCGCC
AGCCAGGCAC TTGAGGATGT GGAGGCGGGC AGGGCGCCCA AGGACGTGTC CCAGGGGCTG
GCCGCGCACC GAGACTGGTC GCTGGCCTTG CTGTTCGGCT CGCGCAGCGC GCTGGCCTTC
CTGGTAATGA GTGGTTTCTG GCTGGCCACG GCCTGGCCTT CGGCCCCCGG TGGCCTGGTG
CTGACCTGCG TGGTCTGCAG CCTGTTCGCC AGTCGCGAGA ACGGCGCACA GATCGGCCTG
AGTTTCCTGC GCGGGATATT CCTGGCGATA CCGGCGGCGT TTGTGGTCGG GCAGATCATG
CTGCCGCAAT GGAGCAGCTT CGCCATGCTC TGCCTGGGCA TGGGCGTGCC ACTGTTTCTT
GGTGCACTGG GCATGGCCCA TCCGCGTACC GGGGCTACGG CCACTTCCTA TTGCCTGCAC
TTCATTGTGC TGGTGTCGCC GCTCAACGCC ATGCAGTTCG GCGTGGCGAC CATGCTGAAC
AGTGCCCTGG CCATGCTGGT GGGGGTGTCG GCAGCGGTCA TGGCCTTTCG CTTGCTGGTG
TTCCGCCATC CGGCCTGGCT GGGCCGGCGC TTGCGTGCTG CAACGCAGAA CGACCTGGTG
CGCCTGACTC GGCGCGACCT GCGCGGGGCT GACAGCTGGT TTGGCGGGCG CATGGCCGAC
CGGCTGATGC AACTGGCGCG GCATGCCAGT GAATTACCGG AAGGCGAACG CAAACGCTGG
GATGACGGCC TTCACGGGCT GGATATCGGC GACGAACTGG TGCACCTGCG CATGTGCCTG
GCGGTCGCTC AGGCCCCTTT GGGGCGGGCC GAGCGCGAGT ACCTGCAACA CGTGGAGGCA
GCGCTGGCCA AAGGGCCTGC TGCCGGGCGT GGGCAGCTGC TGGATGCTGC CAGTGAGCAG
TTCATTGCGG CCTTGCGTCG GCTACCCGCC AGCGACCCGC TTCGCCTGGC CGAGGGGGCA
GTACTGCAAT TGCAGAAAAG CTGGGGCAAA TGGTGCCGCT GGCAGGAGGA CACCCATGGG
TTTGCGTGA
 
Protein sequence
MPITFQALFA PSSLALKFAI KTLLGGGLAL WLAMRWGLEQ PSWALMTAFI VAQPLSGMVV 
QKGLARLAGT LVGTVMSVLF IGLFAQTPGL FLLTLALWLA LCTAASTQLR SAWAYAFVLA
GYTAAIIALP AIDHPLQVFD QAVARCTEIC LGIFCATASS ALLWPMRVEQ QLGGQARQAW
QNGLQAASAM LGGEDEARKG LLESLGRIVA IDSQREHAWF EGNRGRQRAR AIRGLSQKLM
VLLRISRSVR RQWRQLDEGE VEHLTPWLQE VRTLLAQPDQ PSLLLLRQRI WDAAHDEQIS
SAEHFCLARM ALLLDYAMAA SQALEDVEAG RAPKDVSQGL AAHRDWSLAL LFGSRSALAF
LVMSGFWLAT AWPSAPGGLV LTCVVCSLFA SRENGAQIGL SFLRGIFLAI PAAFVVGQIM
LPQWSSFAML CLGMGVPLFL GALGMAHPRT GATATSYCLH FIVLVSPLNA MQFGVATMLN
SALAMLVGVS AAVMAFRLLV FRHPAWLGRR LRAATQNDLV RLTRRDLRGA DSWFGGRMAD
RLMQLARHAS ELPEGERKRW DDGLHGLDIG DELVHLRMCL AVAQAPLGRA EREYLQHVEA
ALAKGPAAGR GQLLDAASEQ FIAALRRLPA SDPLRLAEGA VLQLQKSWGK WCRWQEDTHG
FA