Gene PP_1141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1141 
SymbolbraC 
ID1045445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1306500 
End bp1307615 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content60% 
IMG OID637144536 
Productextracellular ligand-binding receptor 
Protein accessionNP_743302 
Protein GI26987877 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.209837 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAGA TTTCCAAGCT GTTCGCCGCA ATGGTACTGG CCGGGGTAGC CAGCCATTCG 
TTTGCCGCCG ATACCATCAA GATCGGCATC GCCGGTCCCA AGACGGGTCC CGTGACCCAG
TACGGCGACA TGCAGTTCAT CGGCGCCAAG CAAGCCATCA AGGATATCAA CGCCGCGGGC
GGCGTGGATG GCAAGATGCT CGAAGCCAAG GAATACGACG ACGCCTGCGA CCCTAAACAG
GCCGTGGCAG TCGCCAACAA AGTGGTCAAC GACGGCGTCA AGTTCGTGGT CGGCCACCTG
TGCTCCAGCT CCACCCAGCC AGCGTCCGAC ATCTACGAGG ACGAAGGCGT GATCATGATC
ACCCCGGCCG CCACCTCACC GGAAATCACC GCCCGTGGCT ACAAGCTGAT TTTCCGCACC
ATCGGCCTGG ACAGCGCCCA GGGCCCGGCT GCCGGCAACT ACATCGCCGA CCACGTCAAG
CCGAAGGTCG TTGCCGTCCT GCACGACAAG CAGCAGTACG GTGAAGGCAT CGCCACCGCC
GTCAAGCAGA CCCTGGAAAG CAAAGGCACC AAGGTTGCCG TGTTCGAAGG CCTGAACGCG
GGTGACAAGG ACTTCTCCTC GATCATCCAG AAGCTCAAGC AGAACAACGT CGACTTCGTC
TACTACGGCG GCTACCACCC AGAGCTGGGC CTGATCCTGC GCCAGGCTCA GGAAAAAGGC
CTGAAAGCCA AGTTCATGGG TCCGGAAGGC GTGGGTAACG ACTCCATTTC GCAGATCGCC
CAGAACGCCT CCGAAGGCCT GCTGGTCACC CTGCCGAAGT CGTTCGACGC GGACCCGGCG
AACAAGAAGA TCGTCGACGC CATCAAGGCT GACGGCAAGG ACCCAAGCGG CCCGTTCGTA
TTCCCTGCCT ACTCGGCTGT CGAGCTGATC GCTCAAGGCA TCAAGAAAGC CGGTTCCGAT
GATACCGACA AGGTGGCCGA GGCCATCCAC AAAGGCACCT TCAAGACCCC GACCGGCGAC
CTGTCGTTCG ACGACAAAGG CGACCTGAAA GACTTCAAGT TCGTGGTCTA CGAATGGCAC
TTCGGCAAGC CGAAAACCGA AGTCTCCCCT CAGTAA
 
Protein sequence
MIKISKLFAA MVLAGVASHS FAADTIKIGI AGPKTGPVTQ YGDMQFIGAK QAIKDINAAG 
GVDGKMLEAK EYDDACDPKQ AVAVANKVVN DGVKFVVGHL CSSSTQPASD IYEDEGVIMI
TPAATSPEIT ARGYKLIFRT IGLDSAQGPA AGNYIADHVK PKVVAVLHDK QQYGEGIATA
VKQTLESKGT KVAVFEGLNA GDKDFSSIIQ KLKQNNVDFV YYGGYHPELG LILRQAQEKG
LKAKFMGPEG VGNDSISQIA QNASEGLLVT LPKSFDADPA NKKIVDAIKA DGKDPSGPFV
FPAYSAVELI AQGIKKAGSD DTDKVAEAIH KGTFKTPTGD LSFDDKGDLK DFKFVVYEWH
FGKPKTEVSP Q