Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1141 |
Symbol | braC |
ID | 1045445 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 1306500 |
End bp | 1307615 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637144536 |
Product | extracellular ligand-binding receptor |
Protein accession | NP_743302 |
Protein GI | 26987877 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.209837 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAAGA TTTCCAAGCT GTTCGCCGCA ATGGTACTGG CCGGGGTAGC CAGCCATTCG TTTGCCGCCG ATACCATCAA GATCGGCATC GCCGGTCCCA AGACGGGTCC CGTGACCCAG TACGGCGACA TGCAGTTCAT CGGCGCCAAG CAAGCCATCA AGGATATCAA CGCCGCGGGC GGCGTGGATG GCAAGATGCT CGAAGCCAAG GAATACGACG ACGCCTGCGA CCCTAAACAG GCCGTGGCAG TCGCCAACAA AGTGGTCAAC GACGGCGTCA AGTTCGTGGT CGGCCACCTG TGCTCCAGCT CCACCCAGCC AGCGTCCGAC ATCTACGAGG ACGAAGGCGT GATCATGATC ACCCCGGCCG CCACCTCACC GGAAATCACC GCCCGTGGCT ACAAGCTGAT TTTCCGCACC ATCGGCCTGG ACAGCGCCCA GGGCCCGGCT GCCGGCAACT ACATCGCCGA CCACGTCAAG CCGAAGGTCG TTGCCGTCCT GCACGACAAG CAGCAGTACG GTGAAGGCAT CGCCACCGCC GTCAAGCAGA CCCTGGAAAG CAAAGGCACC AAGGTTGCCG TGTTCGAAGG CCTGAACGCG GGTGACAAGG ACTTCTCCTC GATCATCCAG AAGCTCAAGC AGAACAACGT CGACTTCGTC TACTACGGCG GCTACCACCC AGAGCTGGGC CTGATCCTGC GCCAGGCTCA GGAAAAAGGC CTGAAAGCCA AGTTCATGGG TCCGGAAGGC GTGGGTAACG ACTCCATTTC GCAGATCGCC CAGAACGCCT CCGAAGGCCT GCTGGTCACC CTGCCGAAGT CGTTCGACGC GGACCCGGCG AACAAGAAGA TCGTCGACGC CATCAAGGCT GACGGCAAGG ACCCAAGCGG CCCGTTCGTA TTCCCTGCCT ACTCGGCTGT CGAGCTGATC GCTCAAGGCA TCAAGAAAGC CGGTTCCGAT GATACCGACA AGGTGGCCGA GGCCATCCAC AAAGGCACCT TCAAGACCCC GACCGGCGAC CTGTCGTTCG ACGACAAAGG CGACCTGAAA GACTTCAAGT TCGTGGTCTA CGAATGGCAC TTCGGCAAGC CGAAAACCGA AGTCTCCCCT CAGTAA
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Protein sequence | MIKISKLFAA MVLAGVASHS FAADTIKIGI AGPKTGPVTQ YGDMQFIGAK QAIKDINAAG GVDGKMLEAK EYDDACDPKQ AVAVANKVVN DGVKFVVGHL CSSSTQPASD IYEDEGVIMI TPAATSPEIT ARGYKLIFRT IGLDSAQGPA AGNYIADHVK PKVVAVLHDK QQYGEGIATA VKQTLESKGT KVAVFEGLNA GDKDFSSIIQ KLKQNNVDFV YYGGYHPELG LILRQAQEKG LKAKFMGPEG VGNDSISQIA QNASEGLLVT LPKSFDADPA NKKIVDAIKA DGKDPSGPFV FPAYSAVELI AQGIKKAGSD DTDKVAEAIH KGTFKTPTGD LSFDDKGDLK DFKFVVYEWH FGKPKTEVSP Q
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