| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1139 |
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| Symbol | livM |
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| ID | 1045255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 1304138 |
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| End bp | 1305394 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637144534 |
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| Product | leucine/isoleucine/valine transporter permease subunit |
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| Protein accession | NP_743300 |
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| Protein GI | 26987875 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.268722 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.229928 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGAA ATCTCAAACA GGCGTTCTTC AGCGCCTTGC TGGTCTGGGC CGTGGCCTTC
CCGGTACTGG GCCTGAAACT GAGCATCGAC GGCATCAGCC TGGTCGTGCA CAGTCAGGGC
TCGTTCACCA TCAGCATCAT CGCCGTGTGT TCCGTGCTGA TGTTCCTGCG CGTGCTGTTC
GACAAGCAGT GGAGTTCGGT GATGGGCCGC CGATCGGATC GCAAGCTGAT CCCCCCGGCA
GTCAGCAACT ACCTCACCCT GCCCAAGACC CAGCGCTATG TCATCATCGG GTTGATCGTG
GTGGCACTGG TATGGCCGTT CTTCGGCTCT CGTGGTGCGG TCGACATTGC CACGCTGATC
CTGATCTACG TGTTGCTGGG CCTGGGCCTG AATATCGTGG TCGGTCTGGC GGGCCTGCTC
GACCTCGGCT ACGTGGGCTT CTATGCCGTC GGTGCCTACA GCTACGCCAT GCTCTCGCAT
TACCTGGGCT GGAGCTTCTG GGTGTGCCTG CCGATTGCCG GCCTGATGGC TGCCACGTTC
GGCTTCCTGC TCGGCTTCCC GGTGCTGCGC CTGCGTGGTG ACTACCTGGC GATCGTGACC
CTCGGTTTCG GTGAGATCAT CCGCCTGTTC CTGCGTAACC TCACCGACTG GACCGGCGGC
CCCAACGGCA TCAGCAACAT CCCCAAGCCG GAGTTCTTCG GCCTGACCTT CGAACGCCGT
GCGGCCGAGG GCATGCAGAC CTTCCACGAG TTCTTCGGGC TGCAATACAA CTCGATCAAC
AAGGTCATCT TCCTGTATCT GGTGGCCCTG CTGCTGGCCC TGCTGGCGTT GTTCGTGATC
AACCGCCTGC TGCGCATGCC GATCGGCCGT GCCTGGGAAG CCCTGCGTGA AGACGAGATC
GCCTGCCGTG CTCTGGGCCT GAACCCGACC GTGATCAAGC TCTCGGCATT CACCCTGGGT
GCCTGCTTCG CCGGCTTCGC CGGCAGCTTC TTCGCCGCGC GCCAAGGCCT GGTGACGCCG
GAGTCGTTCA CCTTCATCGA GTCGGCGATC ATCCTCGCCA TCGTCGTGCT GGGTGGCATG
GGTTCACAAC TGGGCGTGAT TCTCGCGGCC ATCGTGATGA TCCTGCTGCC TGAGCTGATG
CGTGAGTTCA GCGAATACCG CATGCTGATG TTCGGTGCGC TGATGGTGTT GATGATGATC
TGGCGTCCGC AAGGCCTGCT GCCTATGCAA CGTCCACACA TGGAGCTGCG TCGATGA
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| Protein sequence | MNRNLKQAFF SALLVWAVAF PVLGLKLSID GISLVVHSQG SFTISIIAVC SVLMFLRVLF
DKQWSSVMGR RSDRKLIPPA VSNYLTLPKT QRYVIIGLIV VALVWPFFGS RGAVDIATLI
LIYVLLGLGL NIVVGLAGLL DLGYVGFYAV GAYSYAMLSH YLGWSFWVCL PIAGLMAATF
GFLLGFPVLR LRGDYLAIVT LGFGEIIRLF LRNLTDWTGG PNGISNIPKP EFFGLTFERR
AAEGMQTFHE FFGLQYNSIN KVIFLYLVAL LLALLALFVI NRLLRMPIGR AWEALREDEI
ACRALGLNPT VIKLSAFTLG ACFAGFAGSF FAARQGLVTP ESFTFIESAI ILAIVVLGGM
GSQLGVILAA IVMILLPELM REFSEYRMLM FGALMVLMMI WRPQGLLPMQ RPHMELRR
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