Gene PP_1131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1131 
Symbol 
ID1045442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1294518 
End bp1294982 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content63% 
IMG OID637144526 
Product17 kDa surface antigen 
Protein accessionNP_743292 
Protein GI26987867 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3133] Outer membrane lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.40399 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0112028 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAAAT CCGCTTTGCT GGTGGCGACC TTTACCACCA TGTCGCTGCT GCTGGGGGGC 
TGTGCCTCGA GCCTGACCGG TGACAGCTAC TCCCGTGACG AAGCCCGCCG CGTGCAAACC
GTGCGTATGG GCACCATCGA ATCCCTGCGT CCGGTCAAGA TCGAGGGCAC CAAGACCCCG
ATTGGCGGCG GTGCTGGTGC CATCGTGGGC GGTGTAGCCG GCAGCGCCGT GGGCGGTGGC
CGTGGCAGCA TCGTGGCTGC CGTGATCGGT GCCGTGGCCG GTGGCTTGGC GGGTTCCGCA
GCAGAAGAAG GCTTGACCCG TACCCAAGGT GTCGAAATTA CCGTTCGTGA AGATGATGGC
AGCATGCGCG CCTATGTGCA GGCCGTGCAG GAGAACGAAA TCTTCCGTGT TGGCGACCGA
GTGCGCATCA TGACTGTAGA CGGTACCAGT CGCGTTTCGC ACTGA
 
Protein sequence
MRKSALLVAT FTTMSLLLGG CASSLTGDSY SRDEARRVQT VRMGTIESLR PVKIEGTKTP 
IGGGAGAIVG GVAGSAVGGG RGSIVAAVIG AVAGGLAGSA AEEGLTRTQG VEITVREDDG
SMRAYVQAVQ ENEIFRVGDR VRIMTVDGTS RVSH