| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1129 |
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| Symbol | pdxH |
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| ID | 1045279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 1293450 |
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| End bp | 1294097 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637144524 |
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| Product | pyridoxamine 5'-phosphate oxidase |
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| Protein accession | NP_743290 |
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| Protein GI | 26987865 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0259] Pyridoxamine-phosphate oxidase |
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| TIGRFAM ID | [TIGR00558] pyridoxamine-phosphate oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00425892 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGACCCAAT CCCTGGCCGA TATGCGCCGC GACTACACCC GTGATGGCCT GGCCGAAGAC
CAGGCACCAG GGGAGCCGTT CGCCCTGTTC CACCAGTGGT TCGCCGATGC GGTGAAAACC
GAGCAGGTGC CGGTAGAAGC CAACGCCATG ACCTTGGCCA CCGTGGACGG CGAAGGTCGC
CCGCATTGCC GTGTATTGCT GTTGAAGGGG CTCGACGAGC AGGGTTTCAC CTTCTTCACT
AACTATGACA GCGCCAAGGG CCAGCAACTG CAAGCCAACC CCTTTGCGGC AATGACCTTC
TTCTGGCCGG CGCTGGAGCG TCAGGTGCGC ATCGAGGGCC GGGTGCAGAA GGTCACGGCG
CAGGAGTCGG ATGCCTACTA CCAGGTACGC CCGTTGGGCA GTCGCCTGGG GGCCTGGGCT
TCGCCACAGA GCCGCGTGAT TGCCGGGCGT GAAGAGCTGG AGGGCCTGGT AAAGGCCACC
GAAGCGCGTT TCTCCGACAC CCAGCCGCAC TGCCCTGAGC ATTGGGGGGG ATACCGTTTG
TTGCCCGAGC GCATCGAGTT CTGGCAGGGG CGGGCAAGTC GTCTGCATGA TCGTTTGAAC
TATCGGCTGG TGGACGGGCA GTGGCTGCGA GAGCGGCTGG CGCCCTGA
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| Protein sequence | MTQSLADMRR DYTRDGLAED QAPGEPFALF HQWFADAVKT EQVPVEANAM TLATVDGEGR
PHCRVLLLKG LDEQGFTFFT NYDSAKGQQL QANPFAAMTF FWPALERQVR IEGRVQKVTA
QESDAYYQVR PLGSRLGAWA SPQSRVIAGR EELEGLVKAT EARFSDTQPH CPEHWGGYRL
LPERIEFWQG RASRLHDRLN YRLVDGQWLR ERLAP
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