| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1127 |
|---|
| Symbol | estC |
|---|
| ID | 1045267 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 1291208 |
|---|
| End bp | 1292353 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637144522 |
|---|
| Product | beta-lactamase |
|---|
| Protein accession | NP_743288 |
|---|
| Protein GI | 26987863 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0013499 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGCAGATCC AGGGTCACTA TGAGCTGAAG TTCGAAGCTG TGCGCGAAGC TTTTGCCGCA
CTGTTCGATG ATCCCCAGGA GCGTGGCGCC GCGCTGTGCA TCCAGGTGGG TGGCGAAACC
GTCGTTGACC TGTGGGCCGG CAGTGCCGAC AAGGACGGCC AGCAGGCCTG GCACAGCGAT
ACCATCGCCA ACCTGTTCTC CTGCACCAAG ACCTTCGCGG CCGTTACCGC CCTGCAGTTG
GTCGGCGAGG GCAAGCTGGC CCTCGATGCC CCGGTGGCCA ACTACTGGCC CGAGTTCGCC
CAGGCGGGTA AGCAGTCGAT CACCTTGCGT CAGCTGCTCA GCCACCGTGC CGGCTTGCCG
GCCATTCGTG AGCTGCTGCC GGCTGAAGCC TTGTATGACT GGCAGATCAT GGTCGATGCC
CTGGCAGCCG AGACTCCGTG GTGGACGCCA GGCACAGAAC ACGGCTACGC CGCCATCACC
TTTGGCTGGC TGATCGGCGA GCTGATTCGC CGTGCCGACG GCCGTGGCCC TGGCGACTCG
ATCGTGGCCC GCACCGCCCG CCCATTGGGC CTGGATTTCC ATGTTGGCCT GGCCGACGAG
GAGTTCCACC GCGTGGCGCA TATCGCCCGT GGCAAGGGCA ATGCTGGAGA CAGTGCAGCG
CAACGCTTGC TGCAGGTGAC CATGCGCGAG CCTGAGGCGC TGTCGACCCG TGCCTTTACC
AACCCGCCCG CGATACTGAC CAGCACCAAC AAACCGGAAT GGCGACGCAT GCAGCAGCCA
GCGGCCAATG GCCATGGCAA CGCACGCAGC CTGGCGGGGT TCTATGCCGG GCTGCTGGAC
GGCAGCCTGC TTGAATCCGA ACTGCTCGAT GAGCTGACCC GCGAGCATAG CCTTGGCCAG
GACCGTACCT TGCTCACCCA GACCCGTTTC GGCCTGGGCT GCATGCTCGA CCAGCCCGAT
GTGGCCAATG CCACCTTTGG TCTCGGCGCC CGCGCCTTTG GCCACCCTGG TGCCGGTGGT
TCGGTCGGTT TTGCCGACCC GGAGTACGAT GTGGCCTTCG GTTTTGTGGT CAATACCCTC
GGCCCTTATG TGCTGATGGA CCCACGCGCC CAGAAACTGG TACGCGTCCT TGCCAGTTGC
CTTTGA
|
|---|
| Protein sequence | MQIQGHYELK FEAVREAFAA LFDDPQERGA ALCIQVGGET VVDLWAGSAD KDGQQAWHSD
TIANLFSCTK TFAAVTALQL VGEGKLALDA PVANYWPEFA QAGKQSITLR QLLSHRAGLP
AIRELLPAEA LYDWQIMVDA LAAETPWWTP GTEHGYAAIT FGWLIGELIR RADGRGPGDS
IVARTARPLG LDFHVGLADE EFHRVAHIAR GKGNAGDSAA QRLLQVTMRE PEALSTRAFT
NPPAILTSTN KPEWRRMQQP AANGHGNARS LAGFYAGLLD GSLLESELLD ELTREHSLGQ
DRTLLTQTRF GLGCMLDQPD VANATFGLGA RAFGHPGAGG SVGFADPEYD VAFGFVVNTL
GPYVLMDPRA QKLVRVLASC L
|
|---|
| |