Gene PP_1124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1124 
Symbol 
ID1045261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1286053 
End bp1286517 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content64% 
IMG OID637144519 
Producthypothetical protein 
Protein accessionNP_743285 
Protein GI26987860 
COG category[S] Function unknown 
COG ID[COG5615] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.870352 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000463461 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTCGCCT TTGCCCTGCC CTACACCCTG CATGTTCTGG CCGCACTCGT ATGGGTCGGC 
GGCATGTTCT TCGCCTGGCT GGTGCTGCGC CCGGCAACGG TTGCAGCCCT TGAAGGGCCT
GCCCGCCTGC GCTTGTGGGT GGAAGTTTTC CGACGCTTCT TCGGCTGGGT CTGGCTGGCG
GTGGCGATTT TGGCGATAAG TGGTATCGGC ATGTTGCACA TGCGCTTCAG CGGTTTCGAG
ACGGCGCCCA GATACGTGCA CGTGATGATC GGTGGCGGGA TCGCCATGTT TGCCTTGTTC
ATGCGCATTC AGGCGTTGCT GCTGCCGGAA TTGAAGGCAG CGGTGCAGGC CGAGGACTGG
CCGACGGGTG CGGCGGTACT GGGGCGCATT CGGCGGATGG TGGGGGTCAA TCTGCTGCTG
GGGCTGGCCG TCGTTGCGGT GGCCAGTTCG CGACTGGTGA TCTGA
 
Protein sequence
MLAFALPYTL HVLAALVWVG GMFFAWLVLR PATVAALEGP ARLRLWVEVF RRFFGWVWLA 
VAILAISGIG MLHMRFSGFE TAPRYVHVMI GGGIAMFALF MRIQALLLPE LKAAVQAEDW
PTGAAVLGRI RRMVGVNLLL GLAVVAVASS RLVI