Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1122 |
Symbol | |
ID | 1045258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 1284768 |
End bp | 1285562 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637144517 |
Product | OmpA/MotB domain protein |
Protein accession | NP_743283 |
Protein GI | 26987858 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0205488 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00000560377 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCCTCGAG CAGTGGCACG GGCGCGTCTT CATGCCGGCC AGCCGTTTGT GGCCAATGAC ACAGGAGCAT TCAGCATGAG TGTGACGTCG AAGGCGGCTT TGCCGCTGTT GGTGGCTGCC AGCCTGCTCA CGGGCTGCGC TACGCACAGC GATGGCAGCG CGCCCCTCAA TCAAAGGACC TGGCCCATCT GCAGCCTGCT GGGCGGCTTG GTCGGTGGTG GCCTTGGTGC CATCGAGAGT TCTTCCTGGG CCGCCGGTGG TGGCGCCTTG GGCGCCATTG CCGGCGGGCT GATTTGTTAC GCCCAGGACG GTGACGAAGA TGGTGACGGC ATTTTCGACC GGCGCGATCA CTGCCCCGAG ACCCCGGCCA ACACGGCGGT TGACCACATG GGCTGCCCAC TGAAACAGTA CCCGGCCGCG CCACCTGCCA GTGCACCCGA ACCCTCGCCA GAGGTGATCA CCCTCGATGA CAACGGCGCG GTGATGTTCG CCTTCGACTC CGCCGAACTG ACGCCGGCGG CCCAGCAACG CCTGCAAGGC CTCGTGGAGA AGCTCAATTC ACCGACGGTG GCCAAGGTTC GTGTGATCGG GCACACCGAC AGTGTGGGCT CCGACAGCTA CAACCAGGCA CTTTCCGAAC GCCGCGCCAG CAGCGTTGCC GAGTACCTGA TCGGCCAGGG TCTGGAGATG GGCAAGGTCA CCAGCCAGGG CCGTGGGGAA AGCGAACCGG TTACCGACAA CGAAACCGAG GAGGGCCGCG CGCGCAACCG ACGGGTGGAG CTGCACCTCA ACTGA
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Protein sequence | MPRAVARARL HAGQPFVAND TGAFSMSVTS KAALPLLVAA SLLTGCATHS DGSAPLNQRT WPICSLLGGL VGGGLGAIES SSWAAGGGAL GAIAGGLICY AQDGDEDGDG IFDRRDHCPE TPANTAVDHM GCPLKQYPAA PPASAPEPSP EVITLDDNGA VMFAFDSAEL TPAAQQRLQG LVEKLNSPTV AKVRVIGHTD SVGSDSYNQA LSERRASSVA EYLIGQGLEM GKVTSQGRGE SEPVTDNETE EGRARNRRVE LHLN
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