Gene PP_1122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1122 
Symbol 
ID1045258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1284768 
End bp1285562 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content66% 
IMG OID637144517 
ProductOmpA/MotB domain protein 
Protein accessionNP_743283 
Protein GI26987858 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0205488 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000560377 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCCTCGAG CAGTGGCACG GGCGCGTCTT CATGCCGGCC AGCCGTTTGT GGCCAATGAC 
ACAGGAGCAT TCAGCATGAG TGTGACGTCG AAGGCGGCTT TGCCGCTGTT GGTGGCTGCC
AGCCTGCTCA CGGGCTGCGC TACGCACAGC GATGGCAGCG CGCCCCTCAA TCAAAGGACC
TGGCCCATCT GCAGCCTGCT GGGCGGCTTG GTCGGTGGTG GCCTTGGTGC CATCGAGAGT
TCTTCCTGGG CCGCCGGTGG TGGCGCCTTG GGCGCCATTG CCGGCGGGCT GATTTGTTAC
GCCCAGGACG GTGACGAAGA TGGTGACGGC ATTTTCGACC GGCGCGATCA CTGCCCCGAG
ACCCCGGCCA ACACGGCGGT TGACCACATG GGCTGCCCAC TGAAACAGTA CCCGGCCGCG
CCACCTGCCA GTGCACCCGA ACCCTCGCCA GAGGTGATCA CCCTCGATGA CAACGGCGCG
GTGATGTTCG CCTTCGACTC CGCCGAACTG ACGCCGGCGG CCCAGCAACG CCTGCAAGGC
CTCGTGGAGA AGCTCAATTC ACCGACGGTG GCCAAGGTTC GTGTGATCGG GCACACCGAC
AGTGTGGGCT CCGACAGCTA CAACCAGGCA CTTTCCGAAC GCCGCGCCAG CAGCGTTGCC
GAGTACCTGA TCGGCCAGGG TCTGGAGATG GGCAAGGTCA CCAGCCAGGG CCGTGGGGAA
AGCGAACCGG TTACCGACAA CGAAACCGAG GAGGGCCGCG CGCGCAACCG ACGGGTGGAG
CTGCACCTCA ACTGA
 
Protein sequence
MPRAVARARL HAGQPFVAND TGAFSMSVTS KAALPLLVAA SLLTGCATHS DGSAPLNQRT 
WPICSLLGGL VGGGLGAIES SSWAAGGGAL GAIAGGLICY AQDGDEDGDG IFDRRDHCPE
TPANTAVDHM GCPLKQYPAA PPASAPEPSP EVITLDDNGA VMFAFDSAEL TPAAQQRLQG
LVEKLNSPTV AKVRVIGHTD SVGSDSYNQA LSERRASSVA EYLIGQGLEM GKVTSQGRGE
SEPVTDNETE EGRARNRRVE LHLN