Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1121 |
Symbol | |
ID | 1045249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 1284061 |
End bp | 1284753 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637144516 |
Product | OmpA/MotB domain protein |
Protein accession | NP_743282 |
Protein GI | 26987857 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.372182 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00000554839 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCATAG TACGCACAGC GTTACCCCTG GTACTGCTCA CCAGTGTGTT GACTGGTTGT GCAGGTTTGC AAAAAACCGA CTGGCCGAAA TGTGCCGCCG TCGGGGGTGT AGGCGGCGCC GCCCTGGGCG CCATCGAAAG CTCCAGCTGG GCTGGCTGGG GTGCGTTGCT GGGCGGTGGC CTGGCGGCGG GCTATTGCTG GGCCCATGGC GATGGCGACG AGGATGGTGA CGGCGTGCCA GACAGCCGTG ACAAGTGCCC TGGCACCCCG CGTGGTGTGC AGGTCGATGC CAACGGATGC CCGCCTGAGC CGGTTGCGGT GGTCGAAGAA GTGGTGGTGC AGAAGGAAGA AGTCATTGTC ATCCGCGATG TGCACTTCGA GTTCGATTCT GCGCGCCTGA CGGCCAGTGA CAAAGAGCGC CTCAATACCA TTGCCACGCG CCTGAAGCAG GAAGCGCCCT CTGCCCGCCT TAGCGTCAGC GGCCATACCG ACAGCGTCGG TTCCGACAGC TACAACCAGA AACTGTCCGA GCGCCGTGCC CATTCGGTGA CCGATTACCT GGTCGAGAGC GGTGTACCGC GCAGCAGCTT CGTTTCGGTG GTCGGCGCGG GTGAAACCCA GCCGGTGGCA GACAACGCCA CGGCCGAAGG GCGTGCCATG AACCGTCGTA CCGAGATCAA GATCCAGCGG TAA
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Protein sequence | MSIVRTALPL VLLTSVLTGC AGLQKTDWPK CAAVGGVGGA ALGAIESSSW AGWGALLGGG LAAGYCWAHG DGDEDGDGVP DSRDKCPGTP RGVQVDANGC PPEPVAVVEE VVVQKEEVIV IRDVHFEFDS ARLTASDKER LNTIATRLKQ EAPSARLSVS GHTDSVGSDS YNQKLSERRA HSVTDYLVES GVPRSSFVSV VGAGETQPVA DNATAEGRAM NRRTEIKIQR
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