Gene PP_1118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1118 
Symbol 
ID1045244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1281215 
End bp1282906 
Gene Length1692 bp 
Protein Length563 aa 
Translation table11 
GC content54% 
IMG OID637144513 
Productrecombinase-related protein 
Protein accessionNP_743279 
Protein GI26987854 
COG category[L] Replication, recombination and repair 
COG ID[COG1961] Site-specific recombinases, DNA invertase Pin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.236338 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000608507 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAGCAAGG TTTTCAGCTA CATCAGATTC AGCAGTGCAA AGCAGTCAGC AGGCGACAGC 
TACGCTAGAC AGGTGAAGGC AGCAAAAGCC TTCTGCGATG AGAACGGCCT AGAAATGGCT
GATCCTAGGG AGTATCTGTT CTTCGACAAA GGGCGTTCAG CCTTCAAGGG CAAGCACCTT
GATGACACTG GCGAGCTAGC CCGCTTCCTG AGCTATGTAG AGGACAGCAC CATCCCACCG
GGAAGCTACT TAGTAGTGGA GTCGCTGGAC CGCCTCTCAC GCGAGAAAGT CAGGGATGCG
CTTCCCCGTT TCCTTGACCT GCTGGCCAAA GGCATCAACG TTTACACCAG CGTCGACAAA
CGCCTATACA CCAAGGATTA CAACGAACTC GACCTCATCA TCTCGATCAT CTCCATGTCA
CGTGCACATG AAGAATCGGC AGTGAAAGGG GGCCGGGTAT CGTCTGCTTG GCGTGAGAAG
CAGAAAGCAG CCCGCACCAC TGGCAAGCCC TTGGGCAAGC TCCGTCCTCT CTGGCTGGAT
GTGACACCAG ATGGCTATGT GCTCAACCCT GACAAAGCTG CCGTTGTTCG CCGCATCTTC
GACCTATCCA CCAAGGGTCA TGGCTCCCGC ATCATTGCAG CAACGTTGAA TCAGGAAGGC
ATACCTGCAT TCAGTGCAGG AAGGAAGAAC TTCTCTGGTT TGTGGGGCTT CTCAACAGTG
CGTCACATCC TCGACAGCCG GACGACCCTC GGGGAGTATC AGCCTCACAT ATTCACTGAT
GGCAAGCGAA CGCCTGATGG CGACCCGATC AAGGACTACT TCCCCTCCGT AGTGACGGAG
GATGAATTCT ACCTAGCCCA AGCTGCCCGA ACGTCTCGCA AGACACACAG CGTCACGAAG
GCCACCACCA ATTTCAATGT GCTGGCGGGC ATCCTCAATT GTTACAAGTG CGGGTCAGCC
ATGCACCTCC AAGGACAGCG TGGCCGTAAG TATTACAAAT GCTCCAAGAC AACCAGAGGA
CTGTGTGACG CCGGGATCAT CAGCGCCCCA CGCACCGAGC AAGTGTTCAA GGAGATACTG
ACCAAGGTAG ATAGCTTGTC ACTGGTACAG GACAGCTCTG GCAGCTTGCA GAAGTCCTTG
CAGATCGTAG AAGGCCGCAT AGCTTCGCTG AAGGCACGTC AGGACGATGC CGAGGCTTCA
CACGCTGAAT TCCCATCCCG CATCACTGCG AAGCTGCTGC ACGAGCTAGA AGCCGATATT
GGCGCCCTTG AGTCAGAACG AACCGCTATC GCTGAACAGC TGGCATCTGA CAAAGTGATG
AGCAAACATG ACTTCTTCGA AAAGCTTGAC CTTGTGTCAT TTGAAGGCCG TGTGGCTGCC
AACAACCTTA TCAAGAGGCT TGGCCTGTTC ATCTTCGCTA GCAAGAACGG TAGAACAGAT
GAGACGTACT GGGTCAGCAA GAACAACGCC ATTCCACTCC CATTCAGTGC AGAGACGCCA
AACCTACTCT TCTACCTGAT GCACCGAGGT AAGGAGATTC AATTTGAAGC GATGTATGAC
GAGTACGTAG ACCTTCAGTT GACCCAAGGC GACCTGAACG AGGTGGAAGC CGCCTTTGCC
AAAACTGAAT CTTGGGACAG TCTACCGCCT CACATGCTAG CCATGTGGAA AGCCAGACAT
ATTATCAAAT AA
 
Protein sequence
MSKVFSYIRF SSAKQSAGDS YARQVKAAKA FCDENGLEMA DPREYLFFDK GRSAFKGKHL 
DDTGELARFL SYVEDSTIPP GSYLVVESLD RLSREKVRDA LPRFLDLLAK GINVYTSVDK
RLYTKDYNEL DLIISIISMS RAHEESAVKG GRVSSAWREK QKAARTTGKP LGKLRPLWLD
VTPDGYVLNP DKAAVVRRIF DLSTKGHGSR IIAATLNQEG IPAFSAGRKN FSGLWGFSTV
RHILDSRTTL GEYQPHIFTD GKRTPDGDPI KDYFPSVVTE DEFYLAQAAR TSRKTHSVTK
ATTNFNVLAG ILNCYKCGSA MHLQGQRGRK YYKCSKTTRG LCDAGIISAP RTEQVFKEIL
TKVDSLSLVQ DSSGSLQKSL QIVEGRIASL KARQDDAEAS HAEFPSRITA KLLHELEADI
GALESERTAI AEQLASDKVM SKHDFFEKLD LVSFEGRVAA NNLIKRLGLF IFASKNGRTD
ETYWVSKNNA IPLPFSAETP NLLFYLMHRG KEIQFEAMYD EYVDLQLTQG DLNEVEAAFA
KTESWDSLPP HMLAMWKARH IIK