Gene PP_1117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1117 
Symbol 
ID1045247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1278734 
End bp1279993 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content51% 
IMG OID637144512 
Producthypothetical protein 
Protein accessionNP_743278 
Protein GI26987853 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.142464 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000482056 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGTCGAAAG TAACACAACC CAAGCACACA ACTAAGAGCC GTCGCCCAGT TTGCAAAGCC 
TGCAAGAAGC GCTTCACAAC AAGTGTAGCT ACTGCTAAGT ATTGCTCTAA CAAATGTGGA
GCCACTACCC GCAACAAGAG CAAGAGGATT GACCCGCTTG AAAAGGCTTT GAAATCTGCT
TTCTTCTACT ACATCGCTGG CGAGTGCCTC CGTGCTCAGA CAATCGAAAT TCTACGTGGC
CATACGCTAG AGTCTCTGTG CGAGCTTCAC GAAGTCTATA AGAACAACAT GAAGTGGAAC
GGATATGGTG ATACATCCAC ATACGAGTTG TCCCACATTG CGCCCGTCAA AGGCTCTCAA
ACCCTTGGTT TGCTGTTCGC AGAAAATCTA GTATCCGCTC CCAAAGCCCT CAATCGTGCC
CACGGAGCAA AACACTACGG GTTCGGCAAG TCTGTCAGCC GCTTCTCACT TGATCCTAAG
CATTCTGTGA ACAAATCTTT CAACTCACCT TCTGCAGTAG TGGAAAAGGT CATCAAGTAT
CTTGGAAAGG ATTTGGTGCA GGAGGTCGTC AAGGCGTGCA AGATCAAGCC TACACAACGT
AGCCAACTCA CAGAGTGGAT TATCGACAAC TACAACCCTT CCGACGAGTC CCACCGTGCA
GCCCTGCCAG ACCCGGAGAA GGTACACGAC CTGAAAACCC GAGAACTACA GCACATCAAA
GCAGCCTTGA TAGGTGAAGA AGCAGGCGAT TACGTTTCCT GTCTAGCAGC CCATCCCGCC
GACGTAATGA CCCATGAGCT TTACAGGCTA TCCACCTACC GCCCAGAGCT TGGAATCTAC
GCCTATGCAC TTGAAGACGC CCTAGCAACC CAAGGTGGCG ACTACAGTCT GTTTTCCAAG
CATCACGAAC AAATGCTGTT CGACGTGCTG CATGGAAAGT CGATTGTCGT AATGGCTGAC
ACGCTTGAAA TGGTGATTGG TGAGAACACC GCCTACACCT TCATCACATA CGATGATGCT
GGCGCAGATG ATCTTCCTGC CTACGCTGTT GAGTCCTTCC ACTTCGTGTA TAACCCAAGA
GCAGGTGCAA AACTCCACAG AACGTCGCTG GCTGCTTACA AGGCAACTGC TGGCATCTCT
CATGGTGTAG CAGTGTTGCA CGCTACATTC TTCCCACAGG CTGTCTCAAT GGCCGTATCC
GATGGAGCAA TGGTTGTGCT CGATCCGTGG GGTAACGAAG TGGAGCAACC TCCGTTCTAA
 
Protein sequence
MSKVTQPKHT TKSRRPVCKA CKKRFTTSVA TAKYCSNKCG ATTRNKSKRI DPLEKALKSA 
FFYYIAGECL RAQTIEILRG HTLESLCELH EVYKNNMKWN GYGDTSTYEL SHIAPVKGSQ
TLGLLFAENL VSAPKALNRA HGAKHYGFGK SVSRFSLDPK HSVNKSFNSP SAVVEKVIKY
LGKDLVQEVV KACKIKPTQR SQLTEWIIDN YNPSDESHRA ALPDPEKVHD LKTRELQHIK
AALIGEEAGD YVSCLAAHPA DVMTHELYRL STYRPELGIY AYALEDALAT QGGDYSLFSK
HHEQMLFDVL HGKSIVVMAD TLEMVIGENT AYTFITYDDA GADDLPAYAV ESFHFVYNPR
AGAKLHRTSL AAYKATAGIS HGVAVLHATF FPQAVSMAVS DGAMVVLDPW GNEVEQPPF