Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1116 |
Symbol | |
ID | 1045248 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 1276657 |
End bp | 1277367 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637144511 |
Product | resolvase family site-specific recombinase |
Protein accession | NP_743277 |
Protein GI | 26987852 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00106717 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACAAACG TTGTTGCTTA CATTCGAGTA TCTACCAAGA GTCAAGGTGA CTCTGGCCTA GGTCTGGAAG CCCAGCGTGA TTACATCCAA CGTGCGGCCC AAGCGAACGA CTGGAATGTC GTTGGTGAAT TTGTGGATGT GGTATCGGGC AAGCTCGCTC TTGAAGATCG TCCAGAAGGT GCAAAAGCTC TGACAATGTG CAAACAGCAC AATGCTCAAT TGCTGGTGGC AAAGCTGGAT CGTCTGTCAC GCTCCGTTCT GCACATTGCC CAACTAATGG AGCAAGTTGA TTTCAAAGTG GCCACGATGC CACAGGCAGA CAAGTTTCAA CTCCACCTGT TCGCCGCCCT TGCCCAACAA GAGCGGGAGT TTATCGCCAC GCGCACCAAG GAAGCTCTGG CATCACTCCA GAGGCGTGCA GACGCTGGTG ATGCAGTAGC CCAGCAGAAG GTGGCCAATC GTGCAGAAGC TCAAGCCAAG GGCCGTGCAG TGGCTGACAT TACAGCGGCC AACAACATCC GTATGAGCAA GATCAACACC TACCAAACGA ACATCGAGCC TCACCTGAAA TCCTGCCTGC ATGACAAGAT CAGCACGCTT CAATCTGTAG CCGATTGCCT GAACAGGAAG GGGCTGCGTA CTCCAAGGGG TAGTGAGTTC AACGCCACTG CTGTACGTCG CCTGATGTTG GCACTCAAGG TTTCCTTCTA A
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Protein sequence | MTNVVAYIRV STKSQGDSGL GLEAQRDYIQ RAAQANDWNV VGEFVDVVSG KLALEDRPEG AKALTMCKQH NAQLLVAKLD RLSRSVLHIA QLMEQVDFKV ATMPQADKFQ LHLFAALAQQ EREFIATRTK EALASLQRRA DAGDAVAQQK VANRAEAQAK GRAVADITAA NNIRMSKINT YQTNIEPHLK SCLHDKISTL QSVADCLNRK GLRTPRGSEF NATAVRRLML ALKVSF
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