| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1114 |
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| Symbol | |
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| ID | 1045238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 1273375 |
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| End bp | 1273572 |
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| Gene Length | 198 bp |
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| Protein Length | 65 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637144509 |
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| Product | SEC-C domain-containing protein |
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| Protein accession | NP_743275 |
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| Protein GI | 26987850 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00326895 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTCCCAAC AACCCCACGT TCATGGCCCT GACTGCAACC ATGGCCATGA TCACCACCAC
GACCACGGCC ATGTACACGG CCCGCACTGC AACCACGGCC ACCAGGAGCC GATACGCAAC
GCCCTGAAGG ACGTTGGCCG TAACGACCCG TGCCCGTGCG GTAGCGAGAA GAAGTACAAG
AAGTGCCACG GCGCCTGA
|
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| Protein sequence | MSQQPHVHGP DCNHGHDHHH DHGHVHGPHC NHGHQEPIRN ALKDVGRNDP CPCGSEKKYK
KCHGA
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