| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1105 |
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| Symbol | |
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| ID | 1045250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 1262746 |
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| End bp | 1264404 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637144500 |
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| Product | ATP-dependent DNA ligase |
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| Protein accession | NP_743266 |
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| Protein GI | 26987841 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.660067 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCCT TCGCTACGCT GTTCCTGCGC CTGGACGCGA CCACCTCCAG CAATGCCAAG
CTCGAGGCAC TGCGCGACTA CTTCGACATG GCGCCCGCCG AAGATGCTGC CTGGGCGGTG
TATTTCCTGG CCGGCGGGCG CCCACGCCAG CTGGTGCCCA CCCGCCTTCT ACGCGAACTG
GCGACGACGC TGGCTGGCCT GCCGGACTGG CTTTTCGAAG AAAGCTATCA GGCCGTGGGC
GACCTGGCCG AGACCATTTC GCTGCTGCTG CCGCTGCACG CCGATGGCAA CGAGGAAGGC
CTGGCCACCT GGGTGGAACA GCACTTGCTA CCCCTGCGCG GGCTGACGCC TGAGCAAGTC
CGCCAGCGCC TGCCGCCGCT CTGGGCCCGG TTGGACCGTG CCAGCCTGAT GCTATGCCTG
AAGCTGATCA CTGGCAGCTT TCGCGTGGGC GTGTCAAAGC TGTTGGTCAC CCGCGCCCTG
GCGCAACTGG CCGGGCTGGA CGCCAAACGC GTGGCCCAGC GCCTGGTCGG CTACACCGAT
ATAGGCCATC GCCCGACTGC AGCCAGTTAC CAGAGGCTGA TCGCCCCAGA GTCCGCCGAT
GAACACAACC AGCGTGGCGG TCAGCCCTAC CCATTCTTCC TGGCCCATCC GCTGCAAGTG
TCCAGCGATC AGTTCGATAC CCTGCTCGGA CCACCAAGCG ATTGGCAAAT CGAATGGAAG
TGGGATGGCA TTCGGGCGCA AGTGGTGAAG CGCGATGGCC AGCTGTGGGT GTGGTCACGC
GGCGAAGAAC TGGTTACCGA GCGCTTCCCC GAACTGCATG GCCTGGCACA GACGTTGCCC
GATGGCGTGG TGCTCGATGG CGAGATCCTG GTCTGGAAAC CCGGTGAAAC CGAGACGGAA
CTGGCCGTGC AGCCTTTCGC CTTGCTGCAA CAGCGCATCG GTCGCAAAAC GCTGGGCAAA
AAACTGCTGA ACGATGCGCC GGTGGTGCTG CAGGCCTACG ACCTGCTGGA GTGGCAGGGC
GAGGACTGGC GCAGCCGACC GCAGCACGAA CGCCGAAGCC AGCTGGAACA CCTGGTGGAT
GAACATCCAC TTGCCCCCGT GCTGTTGTCG CCTCTGCTGC AAGGCCCGGA CTGGGCCGAC
CTTGCCCGCC AGCGCGAACA GTCACGCAGC CTGGGCGTGG AAGGGCTGAT GCTGAAGCAA
CGCGAGGCCC TGTACGGTGT GGGGCGCACC AAGGACATGG GCATCTGGTG GAAGTGGAAG
ATCGACCCTT TCAGCGTCGA TGCGGTGCTG ATCTATGCCC AACGCGGCCA CGGCCGCAGG
GCCAGTCTGT ACAGCGACTA CACCTTTGCC GTATGGGATG CACCGGCAGG TACCCCTGGT
CGGGCGTTGG TGCCCTTTGC CAAGGCCTAT TCAGGGCTCA GCGACGAAGA AATGCGCAAG
GTCGACGCCA TCATCCGCAA GACCACGGTG GAAACGTTCG GCCCGGTGCG CAGTGTCACT
CCAACGTTGG TGTTCGAGCT GGGCTTCGAA GGCATCGCCC TGTCCCGGCG CCACAAAAGC
GGTATTGCCG TGCGCTTTCC GCGCATGCTG CGCTGGCGGC TGGACAAGCC GGTGGAAGAA
GCAGATGACC TGGCCACCCT GCAGGCGCTA CTGGCCTGA
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| Protein sequence | MKAFATLFLR LDATTSSNAK LEALRDYFDM APAEDAAWAV YFLAGGRPRQ LVPTRLLREL
ATTLAGLPDW LFEESYQAVG DLAETISLLL PLHADGNEEG LATWVEQHLL PLRGLTPEQV
RQRLPPLWAR LDRASLMLCL KLITGSFRVG VSKLLVTRAL AQLAGLDAKR VAQRLVGYTD
IGHRPTAASY QRLIAPESAD EHNQRGGQPY PFFLAHPLQV SSDQFDTLLG PPSDWQIEWK
WDGIRAQVVK RDGQLWVWSR GEELVTERFP ELHGLAQTLP DGVVLDGEIL VWKPGETETE
LAVQPFALLQ QRIGRKTLGK KLLNDAPVVL QAYDLLEWQG EDWRSRPQHE RRSQLEHLVD
EHPLAPVLLS PLLQGPDWAD LARQREQSRS LGVEGLMLKQ REALYGVGRT KDMGIWWKWK
IDPFSVDAVL IYAQRGHGRR ASLYSDYTFA VWDAPAGTPG RALVPFAKAY SGLSDEEMRK
VDAIIRKTTV ETFGPVRSVT PTLVFELGFE GIALSRRHKS GIAVRFPRML RWRLDKPVEE
ADDLATLQAL LA
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