Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1103 |
Symbol | |
ID | 1045221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 1258998 |
End bp | 1261448 |
Gene Length | 2451 bp |
Protein Length | 816 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637144498 |
Product | DEAD-box ATP dependent DNA helicase |
Protein accession | NP_743264 |
Protein GI | 26987839 |
COG category | [R] General function prediction only |
COG ID | [COG1201] Lhr-like helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGCTG CTACCGACCT CGCCAATGCC TGGTTTGCCA AGCGCGGCTG GAAGCCCTTC GCCTTCCAGC GGCGCGTATG GGCTGCCGTC GAACGGGGCG AATCCGGTTT GCTGCATGCC AGTACCGGTG CCGGCAAGAC CTACGCGGTC TGGCTCGCGG CGCTGCGTGC GTTCAAGCCC AGGCCCCAGG GCCGCCACTT GGCCCCCATA CAGGTGCTGT GGGTGACGCC CATGCGTGCC CTGGCCGCCG ACACTGCACG TGCGTTACAA GCGCCGCTTG ATGAGCTCCA GCTGCCTTGG AGCGTAGGGG TGCGCAGCGG CGACACCAAC AGTGCCGAGC GCGCCCGACA GGCCCGGCGG CTACCCAGTG TGCTGATCAC CACCCCCGAA AGCCTGACCC TGCTGCTGAC CCGGGCAAAG GCACGTGAGG ATTTCGCCAC GCTGCAACTG GTGGTGGTGG ATGAATGGCA CGAGCTGCTT GGCAACAAGC GCGGGGTACA ACTGCAGCTG GCCTTGGCGC GCCTGCGGCA TTGGCACCCG GGCCTACCGA CCTGGGGCTT GTCGGCAACC CTCGGCAACC TGCAACACGC ACGGGATGTC TTGCTGCCCC AGGGCGGCCT GCTGGTGCAA GGCCGGCAAG ACAAGGCACT GCAAGTCGAC ACCCTGCTGC CAAAAGCGAT CGAGCGCTTC CCTTGGGCTG GACACATGGG CCTGAAGATG CTCGACCAGG TCTGTCACGA GATCGATGCC AGTGCCAGTA GCCTGGTGTT CACCAACACC CGCGCCCAGG CAGAAATCTG GTATCAGGCC CTGCTTGAGG CCCGCCCGGA CTGGGCCGGG CTGATCGCCC TGCACCACGC CTCGCTGGCC CGCGATACCC GCGACTGGGT CGAGCGCAGC CTCAAGCAAG GCAGCCTCAA GGCGGTGATC TGCACGTCCA GCCTGGACCT GGGCGTGGAC TTTCTGCCCG TGGAACGGGT GCTGCAAATC GGCTCGGCCA AGGGCATCGC CCGCCTGATG CAGCGGGCGG GTCGCTCAGG ACACGCGCCT GGGCGGCGCT CCAGGGTCAC CCTGGTGCCC ACCCATAGCC TGGAACTGGT GGAAGCGGCG GCGGCCCGGC AGGCGCTGTT AGCCGGCCAC ATCGAAGCCC GCTTTTCACC GCGCCTGTGC ATGGACGTGC TGGTACAGCA TCTGGTCAGC ATGGCCTTGG GCAGCGGTTT TCGCCCGGAG CAACTGCTCG CCGAAGTGCG CAGCACCTGG GCTTTTCGCC AGTTGCGCGA CAGCCAATGG CAATGGGCGC TGGACTTCGT CTGCCACGGC GGCAGCTCAT TGACCGCCTA CCCGGACTAC CAGCGTGTCG AGCGCCAGGC CGACGGAGTT TACCGGGTTA CCAGCGAACG CCTGGCGCGG CGCCACCGCA TGGGCATCGG CACCATCGTC AGCGATGCCA ACCTGCAACT GAAATACTGG AGCAAGGGCG GCGGCGGGAA AACGCTGGGC AGTGTTGAAG AAGCGTTCAT CGCCCGCCTG CGCCCCGGCG ATACCCTGGT GTTTGCCGGG CGGGTACTAG AGCTGGTACG CGTGGAAAAC ATGACGGCCT ATGTGCGTCG CAGCACGGCG CGCAAGGCTG CGGTAGCGCG CTGGAACGGC GGGCGCATGC CGCTCTCGAG CGAACTGGCC GATGCGCTGG TCGAGCAGCT CGATGCTGCC GCCCATGAAC GCTTTGAGGG GCCGGAAATG CGCGCAGTAC GCCCGCTGCT TGCGCTTCAA GCGCAGTGGT CAGCCTTGCC CACCACAAGC ACACTGCTGG CCGAGACCTT CAAATCCCGC CAGGGCTGGC ACCTGTTCCT GTATCCCTTT GCCGGGCGCA TGGCCAACCT GGGCTTGGCC AATCTGATTG CCTGGCGGGT CAGCCGCGCA CAGCCGCTGT CGGTGTCGAT TGCCGTCAAC GATTACGGAT TCGAACTCCT CAGCCCTGCC CAGGTGGACT GGGCCAGTCA CCTGCCGCAA GCACTCGGCA CCGCGGACCT GCTGGAAGAT GTGCTGGCCA GCCTGAATGC CGGGGAGATG GCACTGCGGC GCTTTCGTGA AATTGCCCAG ATTGCCGGGC TGGTGTTTGG CGGCTATCCC GCCGCGCAGA AGAGCACGCG GCAAATCCAG GCCTCCAGCG GGCTATTCTA TGAGGTGTTT CGCAAGCATG ACGCGGGGAA TTTGCTGCTT GGCCAGGCGC GGGATGAAGT ATTGAGCGAA GAGCTGGAAA TCGAACGGCT GCATCGGCAA CTGCTGAAAA TGAGTGAGTT GCAACTGGAC CTGCAGGCGT TGAGGCGGCC AGGGCCACTG GCGTTTGCCT TGTTGGTGGA AGGCATGCGC GAGACATTGA GCACCGAGAA GCTGGCAGAC CGCATTGCGC GGATGGTGGC GGAACTGGAA CAAGCGGCGA ACGCGGGATG A
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Protein sequence | MPAATDLANA WFAKRGWKPF AFQRRVWAAV ERGESGLLHA STGAGKTYAV WLAALRAFKP RPQGRHLAPI QVLWVTPMRA LAADTARALQ APLDELQLPW SVGVRSGDTN SAERARQARR LPSVLITTPE SLTLLLTRAK AREDFATLQL VVVDEWHELL GNKRGVQLQL ALARLRHWHP GLPTWGLSAT LGNLQHARDV LLPQGGLLVQ GRQDKALQVD TLLPKAIERF PWAGHMGLKM LDQVCHEIDA SASSLVFTNT RAQAEIWYQA LLEARPDWAG LIALHHASLA RDTRDWVERS LKQGSLKAVI CTSSLDLGVD FLPVERVLQI GSAKGIARLM QRAGRSGHAP GRRSRVTLVP THSLELVEAA AARQALLAGH IEARFSPRLC MDVLVQHLVS MALGSGFRPE QLLAEVRSTW AFRQLRDSQW QWALDFVCHG GSSLTAYPDY QRVERQADGV YRVTSERLAR RHRMGIGTIV SDANLQLKYW SKGGGGKTLG SVEEAFIARL RPGDTLVFAG RVLELVRVEN MTAYVRRSTA RKAAVARWNG GRMPLSSELA DALVEQLDAA AHERFEGPEM RAVRPLLALQ AQWSALPTTS TLLAETFKSR QGWHLFLYPF AGRMANLGLA NLIAWRVSRA QPLSVSIAVN DYGFELLSPA QVDWASHLPQ ALGTADLLED VLASLNAGEM ALRRFREIAQ IAGLVFGGYP AAQKSTRQIQ ASSGLFYEVF RKHDAGNLLL GQARDEVLSE ELEIERLHRQ LLKMSELQLD LQALRRPGPL AFALLVEGMR ETLSTEKLAD RIARMVAELE QAANAG
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