| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1085 |
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| Symbol | rnt |
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| ID | 1045053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 1243808 |
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| End bp | 1244419 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637144480 |
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| Product | ribonuclease T |
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| Protein accession | NP_743246 |
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| Protein GI | 26987821 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | [TIGR01298] ribonuclease T |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.106932 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCGAGC GCTTCCGCGG CTATCTGCCG GTCGTGGTGG ATGTTGAAAC CGGTGGTTTC
AACAGCGCTA CCGATGCATT GCTGGAAATT GCCGCCGTCA CCATTGGCAT GGACGAGAAA
GGTTTCCTGT TCCCCGAACA TACCTACTTC CACCGAGTGG AGCCGTTCGA GGGCGCCAAC
ATCGAGCCGG CCGCACTTGA GTTCACCGGG ATCAAGCTGG ACCACCCGCT GCGCATGGCG
GTCAGCGAGG AAAGCGCGAT GACCGACATC TTCCGTGGCG TGCGCAAGGC ACTCAAGGCC
AACGGCTGCA AGCGGGCGAT TCTGGTCGGC CACAACAGCA GCTTCGACCT GGGTTTCCTC
AATGCAGCAG TGGCGCGCAA TGACCTGAAG CGCAACCCGT TCCACCCGTT CTCCAGCTTC
GACACCGCCA CCCTGGCGGG CCTGGCGTAT GGCCAGACCG TGCTGGCGCG GGCCTGCCAG
AGCGCCGACA TCGACTTCGA CGGGCGTGAG GCGCACTCGG CACGTTATGA CACCGAGAAA
ACCGCTGAGC TGTTCTGCGG CATCGTCAAC CGCTGGAAAG AAATGGGCGG CTGGCGCGAT
TTCAACGATT GA
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| Protein sequence | MAERFRGYLP VVVDVETGGF NSATDALLEI AAVTIGMDEK GFLFPEHTYF HRVEPFEGAN
IEPAALEFTG IKLDHPLRMA VSEESAMTDI FRGVRKALKA NGCKRAILVG HNSSFDLGFL
NAAVARNDLK RNPFHPFSSF DTATLAGLAY GQTVLARACQ SADIDFDGRE AHSARYDTEK
TAELFCGIVN RWKEMGGWRD FND
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