| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1075 |
|---|
| Symbol | glpK |
|---|
| ID | 1044814 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 1233784 |
|---|
| End bp | 1235283 |
|---|
| Gene Length | 1500 bp |
|---|
| Protein Length | 499 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637144470 |
|---|
| Product | glycerol kinase |
|---|
| Protein accession | NP_743236 |
|---|
| Protein GI | 26987811 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0554] Glycerol kinase |
|---|
| TIGRFAM ID | [TIGR01311] glycerol kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGACA CCCAGGATAA GAACTACATC ATCGCCCTGG ACCAGGGTAC CACCAGTTCG
CGGGCGATCA TTTTCGACCG TGACGCCAAT GTTGTAGGTA CCTCCCAGCG CGAGTTCGCA
CAGCATTACC CGCAGGCGGG CTGGGTCGAG CATGACCCGA TGGAGATTTT CGCCACACAA
AGCGCCACCA TGGTCGAGGC CCTTGCCCAG GCGGGTATCA GCCACGCCCA GGTCGCTGCG
CTGGGCATCA CCAACCAACG CGAAACCACG GTGGTGTGGG ACAAGGAAAC CGGGCGTCCG
GTGTACAACG CCATTGTCTG GCAGTGCCGC CGCAGCACCG AGATCTGTGC TCAGCTCAAG
CGTGACGGCC ATGAAGACTA CATTCGTGAA ACCACCGGCC TGGTCACCGA CCCGTATTTC
TCCGGCACCA AGCTGAAATG GATCCTCGAC AATGTCGACG GCGCCCGTGA ACGCGCCGAG
CGTGGCGAAC TGCTGTTCGG CACCATCGAC ACCTGGCTGA TCTGGAAGCT TACGGGTGGG
AAGGTTCACG TCACCGACTA CACCAATGCC TCGCGCACGC TGATGTTCAA CATCCACAGC
CTGCAGTGGG ACGACAAGCT GCTGGAAATC CTGGGCATCC CGCGGCAGAT GCTGCCTGAG
GTGCGCCCAT CCTCGGAAGT GTACGGCCAC ACCAAGAGCG GCATAGCCAT CGCCGGTATC
GCCGGCGACC AGCAATCGGC ACTGTTCGGC CAGATGTGCG TGGAGCCGGG CCAAGCCAAG
AATACCTACG GCACTGGCTG CTTCCTGTTG ATGAACACGG GCGACCAGGC GGTGAAGTCG
TCCCACGGCC TGCTCACGAC CATTGCCTGC GGCCCGCGTG GTGAGGTGGC CTATGCACTG
GAAGGCGCGG TATTCAATGG TGGCTCTACC GTGCAATGGC TGCGTGACGA ACTGAAGATC
GTCAACGACG CCCTGGATAC CGAGTATTTC GCCAGCAAGG TCAAGGACAG CAATGGCGTG
TACCTGGTGC CAGCCTTTAC CGGCCTGGGT GCCCCGTACT GGGACCCGTA TGCCCGTGGT
GCGTTGTTCG GCCTGACACG TGGCGTGAAG GTAGACCACA TCATCCGCGC CGCACTGGAG
TCCATCGCCT ACCAGACCCG CGATGTCCTC GACGCCATGC AGCAGGACTG TGGCCAGCGC
CTGTCCGAGC TGCGCGTGGA CGGTGGTGCC GTGGCCAACA ACTTCCTCAT GCAGTTCCAG
GCCGACATCC TCGGCACCTG CGTGGAGCGG CCGCAGATGC GCGAAACCAC GGCGCTGGGC
GCCGCCTATC TGGCAGGCCT GGCCTGTGGC TTCTGGAGTG GCCTGGACGA GCTGCGCGAC
AAGGCGATCA TCGAGCGTGA GTTCAGCCCG CAACTGGACG AAACGCAGAA AGAAAAGCTG
TATGCCGGCT GGAAGAAGGC GGTCGAGCGT ACCCGTGACT GGGAAGATCA CGAGGCATGA
|
|---|
| Protein sequence | MTDTQDKNYI IALDQGTTSS RAIIFDRDAN VVGTSQREFA QHYPQAGWVE HDPMEIFATQ
SATMVEALAQ AGISHAQVAA LGITNQRETT VVWDKETGRP VYNAIVWQCR RSTEICAQLK
RDGHEDYIRE TTGLVTDPYF SGTKLKWILD NVDGARERAE RGELLFGTID TWLIWKLTGG
KVHVTDYTNA SRTLMFNIHS LQWDDKLLEI LGIPRQMLPE VRPSSEVYGH TKSGIAIAGI
AGDQQSALFG QMCVEPGQAK NTYGTGCFLL MNTGDQAVKS SHGLLTTIAC GPRGEVAYAL
EGAVFNGGST VQWLRDELKI VNDALDTEYF ASKVKDSNGV YLVPAFTGLG APYWDPYARG
ALFGLTRGVK VDHIIRAALE SIAYQTRDVL DAMQQDCGQR LSELRVDGGA VANNFLMQFQ
ADILGTCVER PQMRETTALG AAYLAGLACG FWSGLDELRD KAIIEREFSP QLDETQKEKL
YAGWKKAVER TRDWEDHEA
|
|---|
| |