Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1067 |
Symbol | |
ID | 1044716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 1221300 |
End bp | 1223207 |
Gene Length | 1908 bp |
Protein Length | 635 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637144462 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | NP_743228 |
Protein GI | 26987803 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.457116 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGATGAAAT GCGATCCCTC GCTACTTCGC CCTGCCAAGC CTGCCGTGAA TTCCCGCCTG ATCCGTCAAT TGCTGTTACC ACCACTGATC ATCCTGCTGA TGGTCGGCCT GGGAATGGCT GGCTACCTGA TCAGCGAGAG CAATGGTATC CGCACCCTCA GCGAAAACGG GGAACGCCAG CTGGAGCTGC ACGCACGCAC GGTCGAAAGC GAAATCAGCA AGTACACCTA CTTGCCGAGC CTGCTGGAGC TGGAAGACAG CGTCTCGCAC CTGCTCACCG ACCCGGACGG CGCCTCACGC CAGACGGTCA ACGAATACCT TGAAGGCCTG AACCGTCGCA GTCGCAGTCG GGCCATCTTC GTCCTCGACA CCAATGGCCG GGTACAGGCC ACCAGCAACT GGCGCGATGC CGACTCGTTC CTGGGTGAAG ACCTGTCGTT CCGCGCCTAC TTCCAGACTG CCGTGCGCGG CGAGCCAGGG CGGTTCTACG GCATCGGCAG TACCACGGGC GAGGCTGGCT ATTACCTGGC CCATGGGCTT GAGGAGCACG GCAAGATCAT AGGCGTTGCG GTGATCAAGG TGCGCCTGGA CACCCTCGAG GAGCGCTGGC AGCGTGCCCG CCTGGAGGCG TTCGTCAGCG ACGAGAATGG CATCATCATT CTCTCCAGCG ACCCGGCCCG GCGCCTCAAG TCGGTGCGCC CGCTGACCCC GCAAATCAAG GAGCGACTGG CGCGAAGCCT GCAGTACTAC TGGTGGCCGC TGAACGAATT GCAGCCCCTG GCCCGGGAAA CCCTAGCCGA TGGTGTGGAA AAACTGACCT TCCCGGCCAA CACCGAAACC GCTCATGGCA AACCGCACGA AGTGGCCTAT CTGGCGCAAA CCAGGCGCCT GGTCGACACC CCCTGGCATT TCACCCTGCT GACCCCACTG CAGGACCTGC GTCGCGAATC CATGGTGCAG GGCATTCTGG TGGGCGTGGC CTTTGCCTTG CTGGCGATCC TCGGCATTGC CTGGAACGAG CGGCGCAAAG TGATCGCCAC CCGCCTGGCG GCCCGCGAAG CCCTTGAAGA GGCCAACAGC CAGCTGGAGC GGCGGATTGC CGAACGCACC GCCGACCTGC GCGCCAGCAA CGAACGCCTC AAGGGCCAGA TTCGCGAGCG CCGGCATGCC GAGCAGACCT TGCGCCACGC CCAGGATGAG CTGGTGCAGG CAGGTAAGCT GGCCGCCATC GGGCAGATGT CCACCAGCAT TGCCCACGAG CTGAACCAGC CACTGGCTGC GCTGCGCACC CTTTCTGGCA ATACAGTGCG CTTCCTCGAG CGCGGGGCGC TGGAAACCGC CAGCACCAAC CTGCGCACCA TGAATGACCT GATCGACCGC ATGGGCCGCA TCACCGCCAG CCTTCGCTCG TTCGCCCGGC GCGGCGATGA CAGCGGCCAG GCTTCACTGG CCAAGGCAGT AGAGGCCACC CTGCAGGTGC TGGCCAACCG CATCAGTGCC TGTCATTTGC AATTGCACCA CCAGTTCGAG GACCAGCAAC TGGCCATCGA CCAGACCCGC CTGGAGCAGA TTCTGGTCAA CCTGATCGGG AATGCCCTTG ACGCCATGGC CGCGCAACCG CAGCCTGAGC TATGGCTGGA AGGCGAGTTG CAGGGTGACA AGTACCGTTT GCAGGTGCGC GACAACGGCC ACGGTATCGA CCCCGAAGCG CGCAAGCACC TGTTCGAACC TTTCTTTACC ACCAAACCGG GCGAGCATGG CCTGGGCCTG GGCCTGACCC TGTCGGCGAG CCTTGCCGCC GCCGCCAAGG GAAGCCTGAA CGTCGAGCAT CCCGTCACAG GCGGCACGGC CTTCGTCCTG GCCCTGCCTC TGGTTTCACC CCCTAGCGAA TCGGCAGAGC ATCCATGA
|
Protein sequence | MMKCDPSLLR PAKPAVNSRL IRQLLLPPLI ILLMVGLGMA GYLISESNGI RTLSENGERQ LELHARTVES EISKYTYLPS LLELEDSVSH LLTDPDGASR QTVNEYLEGL NRRSRSRAIF VLDTNGRVQA TSNWRDADSF LGEDLSFRAY FQTAVRGEPG RFYGIGSTTG EAGYYLAHGL EEHGKIIGVA VIKVRLDTLE ERWQRARLEA FVSDENGIII LSSDPARRLK SVRPLTPQIK ERLARSLQYY WWPLNELQPL ARETLADGVE KLTFPANTET AHGKPHEVAY LAQTRRLVDT PWHFTLLTPL QDLRRESMVQ GILVGVAFAL LAILGIAWNE RRKVIATRLA AREALEEANS QLERRIAERT ADLRASNERL KGQIRERRHA EQTLRHAQDE LVQAGKLAAI GQMSTSIAHE LNQPLAALRT LSGNTVRFLE RGALETASTN LRTMNDLIDR MGRITASLRS FARRGDDSGQ ASLAKAVEAT LQVLANRISA CHLQLHHQFE DQQLAIDQTR LEQILVNLIG NALDAMAAQP QPELWLEGEL QGDKYRLQVR DNGHGIDPEA RKHLFEPFFT TKPGEHGLGL GLTLSASLAA AAKGSLNVEH PVTGGTAFVL ALPLVSPPSE SAEHP
|
| |