Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1063 |
Symbol | metR-1 |
ID | 1044499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 1217490 |
End bp | 1218407 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637144458 |
Product | transcriptional activator MetR |
Protein accession | NP_743224 |
Protein GI | 26987799 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGGAGA TCCGTCACCT GAAAACCCTT CATGCCCTGC GCGAAGCCGA CAGCCTGGTG GAGGCCGCCG AACGCCTGCA CCTGACCCAG TCGGCGTTGT CGCACCAGTT CAAGGAGCTG GAAGAGCGCC TGGGCCTCCC GATTTTCGTG CGCAAGACCA AGCCAATCCG CTTCACCAGC GCCGGGCTGC GTCTGCTGCA ACTGGCTGAT GCCACCCTGC CGTTGCTGCG CAGTGCCGAA CGTGACATCG CACGCCTGGC CGGAGGCACT GCCGGACGCC TGCACATGGC TATTGAATGC CACAGTTGCT TCCAGTGGCT GATGCCGACC ATCGACCAGT TCCGTGATGC CTGGCCGGAA GTGGAACTGG ACCTGGCCTC GGGCTTTGCC TTCGCCCCGC TACCGGCCCT GGCCCGCGGC GACCTTGACC TGGTGGTGAC CTCCGACCCG GTGGACCTGG CAGGCATCAC TTACGTGCCG CTGTTCACCT ACGAGGCGAT GCTGGCAGTG GCCAACCAAC ACCCGCTGGC CAGCAAGCCT TACATCGTGC CGCAAGACTT GCTCGACCAG ACGCTGATCA CCTACCCGGT GGAGCGCGAT CGCCTGGACA TCTTCACGCG CTTCCTGGAG CCGGCCGATA TCGAGCCAGC CGCCGTGCGT ACCTCGGAGC TGACGGTGAT GATGATGCAA CTGGTGGCCA GCGGCCGTGG CGTGTGCGGC ATGCCGCATT GGGCGCTGCA CGAGTACAGC TCGCGCGGCT ATGTGAAGGG CAAACGCCTG GGCGAGAAAG GCCTGTTTGC CACGCTTTAT GCCGCCGTAC GCACCGACAT GCTCGATGCC CCTTACATGC GCGACTTTTT GCTGACGGCC AAGGACACCT CGTTCGCCAC CCTCGACGGC GTCAGCGCGG TGCGTTGA
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Protein sequence | MLEIRHLKTL HALREADSLV EAAERLHLTQ SALSHQFKEL EERLGLPIFV RKTKPIRFTS AGLRLLQLAD ATLPLLRSAE RDIARLAGGT AGRLHMAIEC HSCFQWLMPT IDQFRDAWPE VELDLASGFA FAPLPALARG DLDLVVTSDP VDLAGITYVP LFTYEAMLAV ANQHPLASKP YIVPQDLLDQ TLITYPVERD RLDIFTRFLE PADIEPAAVR TSELTVMMMQ LVASGRGVCG MPHWALHEYS SRGYVKGKRL GEKGLFATLY AAVRTDMLDA PYMRDFLLTA KDTSFATLDG VSAVR
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