Gene PP_1063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1063 
SymbolmetR-1 
ID1044499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1217490 
End bp1218407 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content65% 
IMG OID637144458 
Producttranscriptional activator MetR 
Protein accessionNP_743224 
Protein GI26987799 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGGAGA TCCGTCACCT GAAAACCCTT CATGCCCTGC GCGAAGCCGA CAGCCTGGTG 
GAGGCCGCCG AACGCCTGCA CCTGACCCAG TCGGCGTTGT CGCACCAGTT CAAGGAGCTG
GAAGAGCGCC TGGGCCTCCC GATTTTCGTG CGCAAGACCA AGCCAATCCG CTTCACCAGC
GCCGGGCTGC GTCTGCTGCA ACTGGCTGAT GCCACCCTGC CGTTGCTGCG CAGTGCCGAA
CGTGACATCG CACGCCTGGC CGGAGGCACT GCCGGACGCC TGCACATGGC TATTGAATGC
CACAGTTGCT TCCAGTGGCT GATGCCGACC ATCGACCAGT TCCGTGATGC CTGGCCGGAA
GTGGAACTGG ACCTGGCCTC GGGCTTTGCC TTCGCCCCGC TACCGGCCCT GGCCCGCGGC
GACCTTGACC TGGTGGTGAC CTCCGACCCG GTGGACCTGG CAGGCATCAC TTACGTGCCG
CTGTTCACCT ACGAGGCGAT GCTGGCAGTG GCCAACCAAC ACCCGCTGGC CAGCAAGCCT
TACATCGTGC CGCAAGACTT GCTCGACCAG ACGCTGATCA CCTACCCGGT GGAGCGCGAT
CGCCTGGACA TCTTCACGCG CTTCCTGGAG CCGGCCGATA TCGAGCCAGC CGCCGTGCGT
ACCTCGGAGC TGACGGTGAT GATGATGCAA CTGGTGGCCA GCGGCCGTGG CGTGTGCGGC
ATGCCGCATT GGGCGCTGCA CGAGTACAGC TCGCGCGGCT ATGTGAAGGG CAAACGCCTG
GGCGAGAAAG GCCTGTTTGC CACGCTTTAT GCCGCCGTAC GCACCGACAT GCTCGATGCC
CCTTACATGC GCGACTTTTT GCTGACGGCC AAGGACACCT CGTTCGCCAC CCTCGACGGC
GTCAGCGCGG TGCGTTGA
 
Protein sequence
MLEIRHLKTL HALREADSLV EAAERLHLTQ SALSHQFKEL EERLGLPIFV RKTKPIRFTS 
AGLRLLQLAD ATLPLLRSAE RDIARLAGGT AGRLHMAIEC HSCFQWLMPT IDQFRDAWPE
VELDLASGFA FAPLPALARG DLDLVVTSDP VDLAGITYVP LFTYEAMLAV ANQHPLASKP
YIVPQDLLDQ TLITYPVERD RLDIFTRFLE PADIEPAAVR TSELTVMMMQ LVASGRGVCG
MPHWALHEYS SRGYVKGKRL GEKGLFATLY AAVRTDMLDA PYMRDFLLTA KDTSFATLDG
VSAVR