| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1059 |
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| Symbol | |
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| ID | 1044674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 1209390 |
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| End bp | 1210808 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637144454 |
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| Product | amino acid permease-associated region |
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| Protein accession | NP_743220 |
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| Protein GI | 26987795 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.341828 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGTCG GCAACCACTC TGCCCACGGC CAGGCCACTG AAGGCGGCCC GCTCAAGCGT
GAACTGGGCG AACGGCACAT CCGCCTGATG GCGCTGGGCG CCTGTATCGG TGTCGGTCTT
TTCCTCGGTT CGGCCAAGGC GATCGAAATG GCCGGCCCGG CCATCATGTT GTCCTACATC
ATCGGCGGCC TGGCCATTCT GGTGATCATG CGCGCCCTTG GTGAAATGGC CGTGCACAAC
CCTGTCGCCG GCTCGTTCAG CCGTTATGCC CAGGATTACC TCGGCCCATT GGCGGGCTTC
CTGACCGGCT GGAACTACTG GTTCCTGTGG CTGGTGACCT GTGTTGCCGA AATCACGGCA
GTGGCCATCT ACATGGGCAT CTGGTTCCCC GACGTTCCGC GCTGGATCTG GGCCCTGGCG
GCGCTGGGCA GCATGGGCGC GGTCAACCTG GTGGCGGTGA AGGCTTTTGG TGAGTTCGAG
TTCTGGTTCG CGCTGATCAA GATCGTCACC ATCATCGCCA TGGTGCTTGG CGGCATCGGC
ATCATTGCCT TCGGCTTTGG CAATGACGGT GTGGCAGTGG GGATCTCCAA CCTGTGGAGC
AACGGCGGTT TCATGCCCAA TGGTGTGACC GGCGTGCTGA TGTCGCTGCA GATGGTGATG
TTCGCCTATC TGGGTGTGGA AATGATCGGC CTCACCGCCG GTGAAGCACG CAACCCGCAA
AAGACCATTC CGCAGGCCAT CGGCTCGGTG TTCTGGCGCA TCCTGCTGTT CTACGTCGGC
GCGTTGTTCG TGATCCTGTC GATTTACCCG TGGAACGAAA TCGGTAGCCA GGGCAGCCCG
TTCGTCATGA CCTTCGAGCG CCTCGGCATC AAGACCGCTG CCGGCATCAT CAACTTCGTG
GTCATCACGG CGGCGCTGTC GTCGTGCAAC GGCGGCATCT TCAGCACCGG GCGCATGCTC
TATAGCCTGG CACAGAACGG CCAGGCGCCG GCGGCCTTCG CCCGCACCTC GAAGAACGGC
GTGCCACGCA ATGCGCTGCT GCTGTCGATC GGCGCGTTGC TGCTGGGCGT GCTGGCCAAC
TACCTGGTGC CAGAAAAGGT CTTCGTCTGG GTGACCTCGA TCGCCACCTT CGGTGCGATC
TGGACCTGGG TGATGATCTT GCTGGCGCAG CTGAAGTTCC GTGCCGGCCT TACCACTGCC
GAGCGCAAGG CACTGAAGTA CCGTATGTGG CTGTGGCCGT TGAGCTCGTA TCTGGCACTG
GCCTTCCTGG TGCTGGTGGT GGGGCTGATG GCGTACTTCG AGGATACGCG TGTGGCCCTG
TACATCGGCC CGGCGTTCCT GGTGTTGCTG ACAGTGCTGT ATTACACGTT CCGCCTGGCG
CCGAAAGACG CACAAGGTGT GACGAGTACA GCCTCCTGA
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| Protein sequence | MPVGNHSAHG QATEGGPLKR ELGERHIRLM ALGACIGVGL FLGSAKAIEM AGPAIMLSYI
IGGLAILVIM RALGEMAVHN PVAGSFSRYA QDYLGPLAGF LTGWNYWFLW LVTCVAEITA
VAIYMGIWFP DVPRWIWALA ALGSMGAVNL VAVKAFGEFE FWFALIKIVT IIAMVLGGIG
IIAFGFGNDG VAVGISNLWS NGGFMPNGVT GVLMSLQMVM FAYLGVEMIG LTAGEARNPQ
KTIPQAIGSV FWRILLFYVG ALFVILSIYP WNEIGSQGSP FVMTFERLGI KTAAGIINFV
VITAALSSCN GGIFSTGRML YSLAQNGQAP AAFARTSKNG VPRNALLLSI GALLLGVLAN
YLVPEKVFVW VTSIATFGAI WTWVMILLAQ LKFRAGLTTA ERKALKYRMW LWPLSSYLAL
AFLVLVVGLM AYFEDTRVAL YIGPAFLVLL TVLYYTFRLA PKDAQGVTST AS
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