| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1049 |
|---|
| Symbol | xcpT-1 |
|---|
| ID | 1044442 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 1200343 |
|---|
| End bp | 1200798 |
|---|
| Gene Length | 456 bp |
|---|
| Protein Length | 151 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637144444 |
|---|
| Product | general secretion pathway protein G |
|---|
| Protein accession | NP_743210 |
|---|
| Protein GI | 26987785 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
|---|
| TIGRFAM ID | [TIGR01710] general secretion pathway protein G
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.332195 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGACGA GGAGTATTGC CATGCAGCAT CGACGTAACC GCCAACGCGG TTTCACCCTC
ATGGAAATCA TGGTGGTGAT CTTTATCATC GGCCTGCTGA TTGCCGTGGT AGCGCCCAGC
GTGCTGGGCA ACCAGGACAA GGCCATGAAG CAGAAGGTGA TGGCCGACCT GGCCACCCTG
GAGCAGGCGC TGGACATGTA TCGCCTGGAC AACCTGCGCT TCCCCAGCAA CGAACAGGGC
CTGGCCGCGC TGGTGAAAAA GCCGGCTCAG GAGCCGCTGC CTCGGGCCTG GCGCAGTGAT
GGCTACGTGC GTCGCCTGCC GGAAGACCCG TGGGGCACCC CTTATCAGTA CCGCATGCCC
GGTGAACATG GCCGGGTCGA TGTGTACTCG CTGGGCGCCG ATGGCCTGCC GGGCGGCGAA
GGCCAGGATG CCGACCTGGG TAACTGGGCG CTGTAA
|
|---|
| Protein sequence | MTTRSIAMQH RRNRQRGFTL MEIMVVIFII GLLIAVVAPS VLGNQDKAMK QKVMADLATL
EQALDMYRLD NLRFPSNEQG LAALVKKPAQ EPLPRAWRSD GYVRRLPEDP WGTPYQYRMP
GEHGRVDVYS LGADGLPGGE GQDADLGNWA L
|
|---|
| |