| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1043 |
|---|
| Symbol | uxpB |
|---|
| ID | 1044233 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 1191572 |
|---|
| End bp | 1193647 |
|---|
| Gene Length | 2076 bp |
|---|
| Protein Length | 691 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637144438 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_743204 |
|---|
| Protein GI | 26987779 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3211] Predicted phosphatase |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCGAG ATACCGGCGA CAACCTGGAC CGGAACCAAA GCGGCAACCT GCCGATGGCC
AACGTCATGG ACGCCTACCT GAGCCGCCGC AGCGTGATGC GCGGCAGCCT GGGCGCCGCC
ATCGCCATGA TTGCCGGTAC CGGCCTGACA GGCTGCTTCG ACGGTGGTGG TTCCGATCAC
GATGATCCGG TCACCGAGCC ACCGGTGACC GAACCGCCAG TCACCGAGCC GGAAGTGCCG
AAACTGGCAC TGGGCTTCCA GTCCATCCCA GGCTCGCGCA CCGACGCCTG TGTGGTCGCC
GCCGGCTACA GCGCCTACGT GCTGGCGCCC TGGGGTACGC CACTGAACAG CAACGGCAAC
CCGTGGAAGT CCGACGGCAG CAACACCTCG ACCGACCAGG CCAACGCCAT GGGCATGCAC
CACGACGGCA TGCACTTCTT CCCCATCAAC GGCAGCTCGG AAGACGGCCT GCTGGCGATC
AATTTCGAGT ACATCGACAC TGCCGCCCTG CACCCGGCCG GCCCCACTAC CGATGTCAAC
GGCAAGCGCC CAGTTGAAGA AGTGCGCAAG GAAATCAACG CACACGGTGC GGGCGTCGTA
CGCCTGCAGA AAATCAACGG CCGTTGGCAG GTGGTCGACA ACGACCCGCT GAACCGTCGC
TTCACCACTG CTTCACGCAT GGAGATCACC GGCCCGCTGC GTGGCACCGA CCACGTCAAG
ACCAAATACT CCACTGCTGG CACCCACTGC CGTGGCACCA ACAACAACTG CGGCAACGGC
TATACCCCGT GGGGCACCTA CCTGACCTGC GAAGAGAACT GGCCGGGCAT TTTCGTCAAC
AAAGGCACCC GCCCCGAGGA CCAGCGCCGC ATTGGCGTGG GCACTTCCAG CGGCCAGTAC
AAGTGGGAAA GCGCTGCCGG TGACGCCAGC GAAGTGGACG ACGAATTCGC CCGCTTCGAC
GTTACCGTCA AAGGCGCCAG CGCCACCGAC GACTATCGCA ACGAAGCCAG CACCTACGGC
TACATCGTCG AGATCGACCC GTACAACAGC AGCACCCTGG CCACCAAACG CACCGCGCTG
GGCCGCTTCC GTCACGAGGG CTGCGCCCCC GGCCTGCCCG TCGCCGGCAA GCCGCTGGTG
TGGTACATGG GTGACGACTC GAACAACGAG TACCTGTACA AGTGGGTGTC CACCGCCGTG
TGGGACCCCG CCGACGCCAC CCCGGCCGAC CGCCTGGCCA CCGGCGCCAA GTACCTCGAC
CAAGGCAAGC TCTACGTGGC CCGCTTCAAT GCCGACGGCA CCGGTGTATG GCTGCTGCTG
GACGTGGCCA CCGCCACCAC CGCCGGCAGC ACCCTGGGTG CGCTGTATGG TGACCTGCCG
GGCATCATCC TCAACACCCG TGGTGCCGGC GATGCCGTGG GCGCAACGCC GATGGACCGC
CCGGAGTGGA CCACGGTCAA CCCGCTGAAC GGCGACGTAT ACCTGACCCT GACCAACAAC
AGTGCACGCA CCCCGGACAA GGTCGATGCA GCGAACCCAC GCGGCCCGAA CCGCCACGGC
CACATCATTC GCTGGCACGA CAGCGACGAC CAGCTGAGCT TTACCTGGGA CATCTTCGTG
TTCGGCGCCA ACGCTGCCGG CACCGCCGAC ATCAACCGCT CCGGCCTGAC CGAACTGAAC
CAGTTCGCCA GCCCCGACGG CATGAGCTTC GATAGCCGAG GCGTGCTGTG GTTCGAGACC
GACAACGGCG AAACCACCTT GACCGACTAC ACCAACGACC AGCTGCTGGC GGTGATCCCT
ACCGACCTGG TGGATGCCAG CGGCAAGCAG GTGCCGGTGA ACGCACAGAA CCAGGTGGAC
CTGCGGCGCT TCTTTGTCGG GCCAAATGGT TGCGAGGTGA CCGGGATTAC CTTTACCCCG
GACAACAAGA CGCTGTTCGT CAACATTCAA CACCCGGACA ACTGGCCGTA TACCGACAAG
GCAACCGATG CAACGCCGGC TGGGGCTACC GTACGGCCGC GGGCTTCGAC GGTGGTGATC
CAGCGTATTG ATGGTGGGGA GATCGGGACC GTTTGA
|
|---|
| Protein sequence | MSRDTGDNLD RNQSGNLPMA NVMDAYLSRR SVMRGSLGAA IAMIAGTGLT GCFDGGGSDH
DDPVTEPPVT EPPVTEPEVP KLALGFQSIP GSRTDACVVA AGYSAYVLAP WGTPLNSNGN
PWKSDGSNTS TDQANAMGMH HDGMHFFPIN GSSEDGLLAI NFEYIDTAAL HPAGPTTDVN
GKRPVEEVRK EINAHGAGVV RLQKINGRWQ VVDNDPLNRR FTTASRMEIT GPLRGTDHVK
TKYSTAGTHC RGTNNNCGNG YTPWGTYLTC EENWPGIFVN KGTRPEDQRR IGVGTSSGQY
KWESAAGDAS EVDDEFARFD VTVKGASATD DYRNEASTYG YIVEIDPYNS STLATKRTAL
GRFRHEGCAP GLPVAGKPLV WYMGDDSNNE YLYKWVSTAV WDPADATPAD RLATGAKYLD
QGKLYVARFN ADGTGVWLLL DVATATTAGS TLGALYGDLP GIILNTRGAG DAVGATPMDR
PEWTTVNPLN GDVYLTLTNN SARTPDKVDA ANPRGPNRHG HIIRWHDSDD QLSFTWDIFV
FGANAAGTAD INRSGLTELN QFASPDGMSF DSRGVLWFET DNGETTLTDY TNDQLLAVIP
TDLVDASGKQ VPVNAQNQVD LRRFFVGPNG CEVTGITFTP DNKTLFVNIQ HPDNWPYTDK
ATDATPAGAT VRPRASTVVI QRIDGGEIGT V
|
|---|
| |