| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1036 |
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| Symbol | |
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| ID | 1044173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 1182925 |
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| End bp | 1184274 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637144431 |
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| Product | putative transglycosylase |
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| Protein accession | NP_743197 |
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| Protein GI | 26987772 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.377036 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGGAGG ATGGCGTGCT GCGCGTGATC ACACGCAACA GCCCGGCAAC CTACTTCCAG
GACCGTAACG GCGAAACCGG CTTTGAGTAC GAACTGGTCC AGCATTTCGC CGACGATCTC
GGCGTAAAGC TGCAGATCGA GACCGCCGAC AACCTGGACG AGCTGTACGA CGCCCTCGGC
AAGCCCTCCG GCCCGGTACT GGCTGCCGCC GGCCTGGTCA GCAGTGAGCG GCGCAAAACC
CAGGTGAGAT ACTCCCATCC CTATCTGGAG GTGACCCCGC AGGTCATCTA CCGCAACGGC
CGCCCGCGCC CCACCGGCGC CAAGGGTTTG GTCGGCAAGA AGATCATGGT GCTCAAGGGC
AGCAGCCATG CTGACCAGCT GGCCGAGCTG AAAAAGCAGT ACCCGGCCTT GCAATACGAG
GAATCCGACG CCGTCGAAGT GGTCGACCTG CTGCGCATGG TGGACGAAGG TCAGATCGAC
TTGACCCTGG TGGACTCCAA CGAACTGGCG ATGAACCAGG TGTATTTCCC CAACGTGCGG
GTCGCCTTCG ATCTGGGCGA AACCCGCGAC CAGCGCTGGG CAGTGGCCGC AGGCGAAGAC
AACAGCCTGC TCAACGAAAT CAACGAGTAT CTCGACAAGG CACAGAAAAA CGGCACCCTT
CAGCGATTGA AGGACCGCTA CTACGGCCAT GTCGACGTAC TTGGCTATGT CGGCGCCTAC
ACCTTCGCCC AGCACCTGCA ACAGCGCCTG CCCAAGTACG AGAAGCACTT CAAGAGCTAC
GCCAAGGTCG AGCAGGTCGA CTGGCGCCTG CTGGCAGCCA TTGGCTACCA GGAATCGATG
TGGCAGCCGG AAGTCACCTC CAAGACCGGC GTGCGCGGCC TGATGATGCT GACCCAGCGC
ACCGCCCAGG CCATGGGCGT GTCGAACCGA CTGGACCCGA GGCAGAGCAT CCAGGGCGGC
GCCAAGTACT TCATGAAGAT CAAGGAAGAG CTTGACGACA GCATCAAGGA GCCGGACCGC
ACCTGGTTCG CCCTTGCCGC CTACAATGTC GGTGGCGGCC ACCTGGAAGA CGCCCGCACC
CTGGCCAAGC GCGAGAAGCT GAACCCGAAC AAGTGGCTGG ACGTGAAGAA GATGCTGCCG
CGGCTGGCTC AGAAGCAGTG GTACCGGCAG ACCAAGTACG GCTATGCCCG TGGGGGCGAA
CCGGTGCATT TCGTGGCCAA CATCCGCCGT TACTACGACA TCCTCACCTG GGTGACCCAG
CCGCAGCTGG AAGGCCAGGT GGCCGAGGGC AACCTGCATG TGCCCGGGGT CAACAAGGAC
AAGCCAGCGG ATAAGTCGTC GCCGATGTAA
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| Protein sequence | MKEDGVLRVI TRNSPATYFQ DRNGETGFEY ELVQHFADDL GVKLQIETAD NLDELYDALG
KPSGPVLAAA GLVSSERRKT QVRYSHPYLE VTPQVIYRNG RPRPTGAKGL VGKKIMVLKG
SSHADQLAEL KKQYPALQYE ESDAVEVVDL LRMVDEGQID LTLVDSNELA MNQVYFPNVR
VAFDLGETRD QRWAVAAGED NSLLNEINEY LDKAQKNGTL QRLKDRYYGH VDVLGYVGAY
TFAQHLQQRL PKYEKHFKSY AKVEQVDWRL LAAIGYQESM WQPEVTSKTG VRGLMMLTQR
TAQAMGVSNR LDPRQSIQGG AKYFMKIKEE LDDSIKEPDR TWFALAAYNV GGGHLEDART
LAKREKLNPN KWLDVKKMLP RLAQKQWYRQ TKYGYARGGE PVHFVANIRR YYDILTWVTQ
PQLEGQVAEG NLHVPGVNKD KPADKSSPM
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