Gene PP_1021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1021 
SymbolhexR 
ID1043998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1164539 
End bp1165411 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content65% 
IMG OID637144416 
ProductDNA-binding transcriptional regulator HexR 
Protein accessionNP_743182 
Protein GI161378139 
COG category[K] Transcription 
COG ID[COG1737] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCGCG TGCGAAACCT CCTGGAACAG ATCCAGGGCC GCCTCGACGA GCTGAACAAG 
GCCGAACGCA AAGTCGCCGA AGTCATCCTG CTCAACCCGC AACAAGCCAC CCGTTTCAGC
ATCGCTGCGC TGGCCCAGGC GGCCAAGGTC AGCGAACCGA CCGTCAACCG CTTCTGCCGC
TCGTTCGGCG TCAGCGGCTA CCCCGAACTC AAGCTGCAAC TGGCGCAGAG CCTGGCCAGT
GGTGCCGCCT ATGTCAGCCG CGCGGTAGAG GCCGACGATG ACCCGGCCGC CTACACCCAG
AAGATCTTCG CCAGCGCCAT CGCCTCGCTT GACAGCGCCT GCCAGCAACT GGACCCGCAG
CAGGTCAGCC GCGCCGTGGA CATGATGATC CAGGCCCGGC AGATCCACTT CTTCGGCCTC
GGCGCCTCAG CCCCGGTGGC CCTGGATGCG CAGCACAAGT TCTTCCGCTT CAACCTGGCC
GTGTCGGCCC ACGCCGATGT GCTGATGCAG CGCATGCTGG CCTCGGTCGC CCACACCGGC
GATCTGTTCG TGATCATTTC CTACACCGGG CGCACCCGCG AACTGGTCGA AGTGGCGCGC
CTGGCACGTG AAAACGGCGC TTCGGTGCTG GGCCTCACCG CCGCAGGCTC GCCACTGGCC
AATGCCTGCA GCCTGAGCCT GCACATTCCG CTGCCGGAAG ATACCGACAT CTACATGCCA
ATGACCTCGC GGATCATCCA GCTGACCGTG CTCGATGTAC TGGCCACCGG CATGACCCTG
CGCCGCGGCG TGGACTTCCA GCCTCACCTG CGCAAGATCA AGGAAAGCCT CAACGCCAGC
CGTTACCCGA TCGAGGACGA CGACCTCAAC TGA
 
Protein sequence
MDRVRNLLEQ IQGRLDELNK AERKVAEVIL LNPQQATRFS IAALAQAAKV SEPTVNRFCR 
SFGVSGYPEL KLQLAQSLAS GAAYVSRAVE ADDDPAAYTQ KIFASAIASL DSACQQLDPQ
QVSRAVDMMI QARQIHFFGL GASAPVALDA QHKFFRFNLA VSAHADVLMQ RMLASVAHTG
DLFVIISYTG RTRELVEVAR LARENGASVL GLTAAGSPLA NACSLSLHIP LPEDTDIYMP
MTSRIIQLTV LDVLATGMTL RRGVDFQPHL RKIKESLNAS RYPIEDDDLN