Gene PP_1018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1018 
Symbol 
ID1044180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1161036 
End bp1162190 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content64% 
IMG OID637144413 
Productsugar ABC transporter, ATP-binding subunit 
Protein accessionNP_743179 
Protein GI26987754 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACGC TCGAACTTCG CAATGTGAAC AAGACCTACG GCAGCGGCCT GCCGGATACC 
CTCAAGGACA TCCAGCTGTC GATCAAGGAC GGCGAGTTCC TGATCCTGGT GGGCCCGTCG
GGCTGCGGCA AGTCGACCCT GATGAACTGT ATCGCCGGCC TGGAGCAGAT CACCGGCGGC
GCCATCCTCA TCGACGAACA GGACGTCAGT GGCATGAGCC CGAAGGACCG CGATATCGCC
ATGGTGTTCC AGTCCTATGC GCTGTACCCC ACCATGAGCG TGCGTGAAAA CATCGAGTTC
GGCCTGAAGA TTCGCAAGCT GCCCCAGGCC GCCATCGACG AGGAAGTGGC GCGGGTGGCC
AAGTTGCTGC AGATCGAACA CCTGCTGGCG CGCAAGCCGG CGCAGCTGTC CGGTGGCCAA
CAGCAGCGCG TGGCCATGGG CCGGGCATTG GCGCGGCGAC CCAAGATCTA CCTGTTCGAT
GAACCCCTGT CCAACCTCGA TGCCAAGCTG CGGGTCGAAA TGCGCACCGA AATGAAGTTG
ATGCACCAGC GCCTGAAGAC CACCACGGTG TACGTCACCC ATGACCAGAT CGAGGCCATG
ACCCTGGGCG ACAAGGTGGC GGTGATGAAG GACGGCATCA TCCAGCAGTT CGGCACCCCG
CAGCAGATCT ACAACGACCC GGCCAACCAG TTCGTGGCCA GCTTCATCGG TTCGCCGCCA
ATGAACTTCA TTCCGGTGCG TCTGGCCAGG CAGGATGGCC GCTTGCTGGC GCTGCTCGAC
AGCGGCCAGG CGCGCTGCGA ACTGCCCTTG GGGGAGGCTG CTGACGCGCT TGAGGGGCGC
GAGATCATCC TCGGCATCCG CCCTGAGCAG ATCGCCCTGG GCGCTGCTGA CGGCAATGGT
TTGCCGGCTA TCCGCGCCGA GGTGCAGGTG ACAGAGCCCA CCGGGCCGGA CCTGCTGGTG
TTCGTCACGC TCAACCAGAC CAAGGTGTGC TGCCGCCTGG CGCCAGATGT GGCGTGCCGG
GTGGGTGACA CCCTCAACCT GCAATTCGAC CCGGCCCGGG TGCTGCTGTT CGACGCCGCC
AATGGCGAGC GCCTGCACCT GGCCAGTACT GGCGCAACCG CAAAGGACAA CGTGGCTCAC
TTCAAAGGCC GTTGA
 
Protein sequence
MATLELRNVN KTYGSGLPDT LKDIQLSIKD GEFLILVGPS GCGKSTLMNC IAGLEQITGG 
AILIDEQDVS GMSPKDRDIA MVFQSYALYP TMSVRENIEF GLKIRKLPQA AIDEEVARVA
KLLQIEHLLA RKPAQLSGGQ QQRVAMGRAL ARRPKIYLFD EPLSNLDAKL RVEMRTEMKL
MHQRLKTTTV YVTHDQIEAM TLGDKVAVMK DGIIQQFGTP QQIYNDPANQ FVASFIGSPP
MNFIPVRLAR QDGRLLALLD SGQARCELPL GEAADALEGR EIILGIRPEQ IALGAADGNG
LPAIRAEVQV TEPTGPDLLV FVTLNQTKVC CRLAPDVACR VGDTLNLQFD PARVLLFDAA
NGERLHLAST GATAKDNVAH FKGR