Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1018 |
Symbol | |
ID | 1044180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 1161036 |
End bp | 1162190 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637144413 |
Product | sugar ABC transporter, ATP-binding subunit |
Protein accession | NP_743179 |
Protein GI | 26987754 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACGC TCGAACTTCG CAATGTGAAC AAGACCTACG GCAGCGGCCT GCCGGATACC CTCAAGGACA TCCAGCTGTC GATCAAGGAC GGCGAGTTCC TGATCCTGGT GGGCCCGTCG GGCTGCGGCA AGTCGACCCT GATGAACTGT ATCGCCGGCC TGGAGCAGAT CACCGGCGGC GCCATCCTCA TCGACGAACA GGACGTCAGT GGCATGAGCC CGAAGGACCG CGATATCGCC ATGGTGTTCC AGTCCTATGC GCTGTACCCC ACCATGAGCG TGCGTGAAAA CATCGAGTTC GGCCTGAAGA TTCGCAAGCT GCCCCAGGCC GCCATCGACG AGGAAGTGGC GCGGGTGGCC AAGTTGCTGC AGATCGAACA CCTGCTGGCG CGCAAGCCGG CGCAGCTGTC CGGTGGCCAA CAGCAGCGCG TGGCCATGGG CCGGGCATTG GCGCGGCGAC CCAAGATCTA CCTGTTCGAT GAACCCCTGT CCAACCTCGA TGCCAAGCTG CGGGTCGAAA TGCGCACCGA AATGAAGTTG ATGCACCAGC GCCTGAAGAC CACCACGGTG TACGTCACCC ATGACCAGAT CGAGGCCATG ACCCTGGGCG ACAAGGTGGC GGTGATGAAG GACGGCATCA TCCAGCAGTT CGGCACCCCG CAGCAGATCT ACAACGACCC GGCCAACCAG TTCGTGGCCA GCTTCATCGG TTCGCCGCCA ATGAACTTCA TTCCGGTGCG TCTGGCCAGG CAGGATGGCC GCTTGCTGGC GCTGCTCGAC AGCGGCCAGG CGCGCTGCGA ACTGCCCTTG GGGGAGGCTG CTGACGCGCT TGAGGGGCGC GAGATCATCC TCGGCATCCG CCCTGAGCAG ATCGCCCTGG GCGCTGCTGA CGGCAATGGT TTGCCGGCTA TCCGCGCCGA GGTGCAGGTG ACAGAGCCCA CCGGGCCGGA CCTGCTGGTG TTCGTCACGC TCAACCAGAC CAAGGTGTGC TGCCGCCTGG CGCCAGATGT GGCGTGCCGG GTGGGTGACA CCCTCAACCT GCAATTCGAC CCGGCCCGGG TGCTGCTGTT CGACGCCGCC AATGGCGAGC GCCTGCACCT GGCCAGTACT GGCGCAACCG CAAAGGACAA CGTGGCTCAC TTCAAAGGCC GTTGA
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Protein sequence | MATLELRNVN KTYGSGLPDT LKDIQLSIKD GEFLILVGPS GCGKSTLMNC IAGLEQITGG AILIDEQDVS GMSPKDRDIA MVFQSYALYP TMSVRENIEF GLKIRKLPQA AIDEEVARVA KLLQIEHLLA RKPAQLSGGQ QQRVAMGRAL ARRPKIYLFD EPLSNLDAKL RVEMRTEMKL MHQRLKTTTV YVTHDQIEAM TLGDKVAVMK DGIIQQFGTP QQIYNDPANQ FVASFIGSPP MNFIPVRLAR QDGRLLALLD SGQARCELPL GEAADALEGR EIILGIRPEQ IALGAADGNG LPAIRAEVQV TEPTGPDLLV FVTLNQTKVC CRLAPDVACR VGDTLNLQFD PARVLLFDAA NGERLHLAST GATAKDNVAH FKGR
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