Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1016 |
Symbol | |
ID | 1044004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 1159286 |
End bp | 1160194 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637144411 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | NP_743177 |
Protein GI | 26987752 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACGA CCACCGCCCA ACTGCGGGCC TCACCCCTGG ACGCGCTTCA GCGCTGGCTG CCCAAGCTGG TGCTGGCACC CAGCATGTTC ATCGTCCTGG TGGGCTTCTA CGGCTACATC CTCTGGACCT TCGTGCTGTC CTTCACCACC TCGACCTTTC TGCCCACCTA CAAGTGGGCG GGCCTTGCGC AATACGCCCG TCTGTTCGAC AACGACCGCT GGTGGGTGGC GAGCAAGAAC CTGCTTCTGT TCGGCGGCCT GTTCATCGCC ATCAGCCTGG CCATCGGTGT GTTGCTGGCG GTGCTGCTGG ACCAGCGCAT CCGTCGCGAG GGCTTCATTC GCACCATTTA CCTGTACCCC ATGGCACTGT CGATGATCGT CACCGGCACG GCCTGGAAGT GGCTGCTCAA CCCGGGCATG GGCCTGGACA AGCTGCTGCG CGACTGGGGC TGGGAGGGCT TTCGCCTGGA CTGGCTGATC GATCCCGACC GGGTGGTGTA TTGCCTGGTG ATCGCGGCCG TGTGGCAGGC TTCGGGCTTC ATCATGGCCA TGTTCCTTGC CGGCTTGCGT GGCGTCGACC CGTCGATCAT CCGCGCTGCG CAGATGGATG GCGCCAGCCT GCCGCGCATC TACTGGACCG TGGTGCTGCC CAGCCTGCGC CCGGTGTTCT TCAGCGCGCT GATGATCCTC TCGCACATTG CCATCAAGAG CTTCGACCTG GTGGCGGCAA TGACGGCCGG CGGCCCGGGT TACTCCTCCG ACTTGCCGGC CATGTTCATG TACTCGTTCA CCTTCAGCCG CGGCCAGATG GGCATGGGCT CGGCCAGCGC CATCCTGATG CTCGGGGCAA TCCTGGCGAT CCTCGTGCCT TACCTGTACT CGGAGCTGCG GAGCAAACGC CATGCATAG
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Protein sequence | MTTTTAQLRA SPLDALQRWL PKLVLAPSMF IVLVGFYGYI LWTFVLSFTT STFLPTYKWA GLAQYARLFD NDRWWVASKN LLLFGGLFIA ISLAIGVLLA VLLDQRIRRE GFIRTIYLYP MALSMIVTGT AWKWLLNPGM GLDKLLRDWG WEGFRLDWLI DPDRVVYCLV IAAVWQASGF IMAMFLAGLR GVDPSIIRAA QMDGASLPRI YWTVVLPSLR PVFFSALMIL SHIAIKSFDL VAAMTAGGPG YSSDLPAMFM YSFTFSRGQM GMGSASAILM LGAILAILVP YLYSELRSKR HA
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