Gene PP_1015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1015 
Symbol 
ID1043966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1157866 
End bp1159152 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content61% 
IMG OID637144410 
Productsugar ABC transporter, periplasmic sugar-binding protein 
Protein accessionNP_743176 
Protein GI26987751 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCCA CGCTTCGTCT CGCTGCCGCA ATTTCCTTTG CCTCGTTAAT CCCCTTGGGT 
GCCCAGGCTG CTGACGCCAA AGGCAGTGTC GAAGTGGTGC ACTGGTGGAC CTCCGGTGGT
GAAAAAGCGG CGGTCGATGT GCTCAAGGCC CAGGTCGAAA AAGACGGCTT CATCTGGAAG
GACGGCGCCG TCGCCGGCGG CGGTGGTGCA ACGGCCATGA CCGTGCTCAA AAGCCGCGCA
GTGGCCGGCA ACCCGCCGGG CGTCGCGCAG ATCAAAGGCC CGGACATCCA GGACTGGGCG
GCCACCGGCC TGCTCGACGC CGATGTGCTC AAGGATGTGG CCAAGGAAGG AAAGTGGGAC
TCGCTGCTCG ACAAGAAAGT GGCCGACACC GTGAAGTACG ACGGTGACTA CGTTGCCGTA
CCGGTGAATA TCCACCGCAT CAACTGGCTG TGGATCAACC CCGAGGTGTT CAAAAAAGCC
GGCATCGACA AGGCGCCCAC CACCCTCGAC GAATTCTACG CCGCCGCCGA CAAGCTCAAG
GCTGCCGGTT TCATCCCGCT CGCCCATGGT GGGCAACCCT GGCAGGACAG CACCGTGTTC
GAAAGCGTGG TGCTGTCGGT GATGGGCGTC GATGGCTACA AGAAGGCCTT GGTCGACCTC
GACAGCGCAA CGCTGACCGG GCCGCAGATG GTCAAGGCGC TGACCGAGTT GAAGAAAGTC
GCCACCTACA TGGACCCGGA CGGCAAGGGC CAGGACTGGA ACCTGGAAGC CGCCAAGGTC
ATTAACGGCA AGGCCGGCAT GCAGATCATG GGCGACTGGG CCAAGAGCGA ATGGACCCTG
GCGAAGAAAA CTGCTGGCAA GGATTACCAG TGCGTGCCGT TCCCCGGTAC TGACAAGTCC
TTCCTGTACA ACATCGACTC GTTGGTGGTG TTCAAGCAGA ACAACGCTGG CACCTCTGCT
GGTCAGCAGG ACATCGCCCG CAAGGTGTTG GGTGAGGACT TCCAGAAGGT CTTCAGCATC
AACAAGGGTT CGATCCCGGT ACGCAACGAC ATGCTTGCCG ACATGGGCAA GTATGGTTTC
GATGCCTGTG CTCAAACCTC CGCCAAGGAC TTCCTGGCTG ACGCCAAAAC GGGCGGCCTG
CAACCGAGCA TGGCGCACAA CATGGCCACC ACGCTGGCCG TGCAGGGCGC GTTCTTCGAT
GTGGTGACCA ACTACATCAA CGACCCCAAG GCCGACCCGG CCGATGCGGC GAAGAAGCTG
GCGGCGGCTA TCAAGGCTGC CCAGTAA
 
Protein sequence
MNSTLRLAAA ISFASLIPLG AQAADAKGSV EVVHWWTSGG EKAAVDVLKA QVEKDGFIWK 
DGAVAGGGGA TAMTVLKSRA VAGNPPGVAQ IKGPDIQDWA ATGLLDADVL KDVAKEGKWD
SLLDKKVADT VKYDGDYVAV PVNIHRINWL WINPEVFKKA GIDKAPTTLD EFYAAADKLK
AAGFIPLAHG GQPWQDSTVF ESVVLSVMGV DGYKKALVDL DSATLTGPQM VKALTELKKV
ATYMDPDGKG QDWNLEAAKV INGKAGMQIM GDWAKSEWTL AKKTAGKDYQ CVPFPGTDKS
FLYNIDSLVV FKQNNAGTSA GQQDIARKVL GEDFQKVFSI NKGSIPVRND MLADMGKYGF
DACAQTSAKD FLADAKTGGL QPSMAHNMAT TLAVQGAFFD VVTNYINDPK ADPADAAKKL
AAAIKAAQ