Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1015 |
Symbol | |
ID | 1043966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 1157866 |
End bp | 1159152 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637144410 |
Product | sugar ABC transporter, periplasmic sugar-binding protein |
Protein accession | NP_743176 |
Protein GI | 26987751 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTCCA CGCTTCGTCT CGCTGCCGCA ATTTCCTTTG CCTCGTTAAT CCCCTTGGGT GCCCAGGCTG CTGACGCCAA AGGCAGTGTC GAAGTGGTGC ACTGGTGGAC CTCCGGTGGT GAAAAAGCGG CGGTCGATGT GCTCAAGGCC CAGGTCGAAA AAGACGGCTT CATCTGGAAG GACGGCGCCG TCGCCGGCGG CGGTGGTGCA ACGGCCATGA CCGTGCTCAA AAGCCGCGCA GTGGCCGGCA ACCCGCCGGG CGTCGCGCAG ATCAAAGGCC CGGACATCCA GGACTGGGCG GCCACCGGCC TGCTCGACGC CGATGTGCTC AAGGATGTGG CCAAGGAAGG AAAGTGGGAC TCGCTGCTCG ACAAGAAAGT GGCCGACACC GTGAAGTACG ACGGTGACTA CGTTGCCGTA CCGGTGAATA TCCACCGCAT CAACTGGCTG TGGATCAACC CCGAGGTGTT CAAAAAAGCC GGCATCGACA AGGCGCCCAC CACCCTCGAC GAATTCTACG CCGCCGCCGA CAAGCTCAAG GCTGCCGGTT TCATCCCGCT CGCCCATGGT GGGCAACCCT GGCAGGACAG CACCGTGTTC GAAAGCGTGG TGCTGTCGGT GATGGGCGTC GATGGCTACA AGAAGGCCTT GGTCGACCTC GACAGCGCAA CGCTGACCGG GCCGCAGATG GTCAAGGCGC TGACCGAGTT GAAGAAAGTC GCCACCTACA TGGACCCGGA CGGCAAGGGC CAGGACTGGA ACCTGGAAGC CGCCAAGGTC ATTAACGGCA AGGCCGGCAT GCAGATCATG GGCGACTGGG CCAAGAGCGA ATGGACCCTG GCGAAGAAAA CTGCTGGCAA GGATTACCAG TGCGTGCCGT TCCCCGGTAC TGACAAGTCC TTCCTGTACA ACATCGACTC GTTGGTGGTG TTCAAGCAGA ACAACGCTGG CACCTCTGCT GGTCAGCAGG ACATCGCCCG CAAGGTGTTG GGTGAGGACT TCCAGAAGGT CTTCAGCATC AACAAGGGTT CGATCCCGGT ACGCAACGAC ATGCTTGCCG ACATGGGCAA GTATGGTTTC GATGCCTGTG CTCAAACCTC CGCCAAGGAC TTCCTGGCTG ACGCCAAAAC GGGCGGCCTG CAACCGAGCA TGGCGCACAA CATGGCCACC ACGCTGGCCG TGCAGGGCGC GTTCTTCGAT GTGGTGACCA ACTACATCAA CGACCCCAAG GCCGACCCGG CCGATGCGGC GAAGAAGCTG GCGGCGGCTA TCAAGGCTGC CCAGTAA
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Protein sequence | MNSTLRLAAA ISFASLIPLG AQAADAKGSV EVVHWWTSGG EKAAVDVLKA QVEKDGFIWK DGAVAGGGGA TAMTVLKSRA VAGNPPGVAQ IKGPDIQDWA ATGLLDADVL KDVAKEGKWD SLLDKKVADT VKYDGDYVAV PVNIHRINWL WINPEVFKKA GIDKAPTTLD EFYAAADKLK AAGFIPLAHG GQPWQDSTVF ESVVLSVMGV DGYKKALVDL DSATLTGPQM VKALTELKKV ATYMDPDGKG QDWNLEAAKV INGKAGMQIM GDWAKSEWTL AKKTAGKDYQ CVPFPGTDKS FLYNIDSLVV FKQNNAGTSA GQQDIARKVL GEDFQKVFSI NKGSIPVRND MLADMGKYGF DACAQTSAKD FLADAKTGGL QPSMAHNMAT TLAVQGAFFD VVTNYINDPK ADPADAAKKL AAAIKAAQ
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