| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1010 |
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| Symbol | edd |
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| ID | 1044125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 1151274 |
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| End bp | 1153100 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637144405 |
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| Product | phosphogluconate dehydratase |
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| Protein accession | NP_743171 |
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| Protein GI | 26987746 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR01196] 6-phosphogluconate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.765635 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCCGC GCATCCTTGA GGTCACCCAG CGGCTGGTCG AACGCAGCCG CGCCACCCGC
GAACGCTACC TGCAACTGAT TCGCGGCGCG GCCAGTGAAG GCCCCATGCG TGCCAGCCTG
CAGTGCGCCA ACTTCGCCCA CGGCGTGGCC GGTTGCGGCA GCGAAGACAA GCAGACTCTG
CGCCTGATGA ACGCGGCCAA CGTGGCCATC GTCTCGGCCT ACAACGACAT GTTGTCTGCC
CACCAGCCTT ACTTGCACTT CCCCGAGCAG ATCAAGCAGG CCCTGCGCGA GGTCGGCTCG
GTCGGCCAGT TCGCCGGTGG CGTGCCGGCC ATGTGCGATG GGGTGACCCA GGGCGAGCCG
GGCATGGAGC TGGCGATCGC CAGCCGTGAA GTGATCGCGA TGTCCACGGC GGTAGCGCTG
TCGCACAACA TGTTCGACGC GGCACTCATG CTGGGCATCT GCGACAAGAT CGTCCCCGGC
CTGATGATGG GCGCGTTGCG CTTCGGCCAC CTGCCGACCA TCTTCGTCCC GGGTGGGCCA
ATGGTTTCCG GCATCTCCAA CAAGCAGAAG GCCGATGTGC GCCAGCGCTA TGCCGAAGGC
AAGGCCAGCC GCGAAGAGCT GTTGGAGTCC GAGATGAATT CCTACCACAG CCCCGGCACC
TGCACCTTCT ACGGCACCGC CAACACCAAC CAGTTGGTGA TGGAAGTGAT GGGGCTGCAC
CTGCCGGGCG CCTCGTTCGT CAACCCGTAC ACGCCGCTGC GTGACGCACT CACCGCCGAG
GCTGCGCAGC AGGTGACGCG CATGACCAAG GCCAGCGGCA GCTTCATGCC GCTGGGCGAA
ATCGTCGACG AGAAGGCGCT GGTCAACTCC ATCGTCGCGC TGCACGCTAC CGGCGGCTCG
ACCAACCACA CCCTGCACAT CCCGGCGATC GCCCAGGCTG CGGGTATCCA GCTGACCTGG
CAGGACATGG CCGACCTCTC CGAAGTGGTG CCGACCCTGT CGCACGTCTA CCCCAACGGC
AAGGCCGACA TCAACCACTT CCAGGCTGCC GGCGGCATGG CCTTCCTGAT TCGTGAACTG
CTCGACGCCG GCCTGCTGCA CGAAGATGTC AACACCGTGG CCGGCCATGG CCTGCGCCGC
TACACCCAGG AACCCTTCCT CGACAATGGC AAGCTGGTGT GGCGCGAAGG GCCGCAACAC
AGCCTGGACG AAAGCATCCT GCGCCCGGTG TCGCGACCAT TCTCGGCCGA AGGCGGTCTG
CGGGTGATGG AAGGCAACCT GGGCCGTGGC GTGATGAAAG TATCTGCCGT CGCCCCCGAG
CACCAGGTGG TCGAGGCCCC GGCGCGGGTG TTCCAGGACC AGCAGTCGCT GGCCGATGCG
TTCAAGGCCG GTGAGCTGGA GCGTGACTTT GTCGCGGTGG TGCGCTTCCA GGGCCCGCGC
TGCAATGGCA TGCCGGAACT GCACAAGCTC ACCCCGTTCC TCGGTGTATT GCAGGACCGT
GGCTACAAGG TTGCGTTGGT CACCGACGGG CGCATGTCCG GTGCCTCGGG CAAGATCCCC
GCGGCCATCC ACGTTTGCCC GGAGGCTTAC GACGGCGGCC CGCTGGCACG GGTGCGCGAT
GGTGATATCG TGCGGGTCGA CGGAGTCGAA GGCACGTTGC GGATCATGGT GTCGGCCGAA
GAACTGGCCA GCCGTGAGCT GCCGCCGGCA CCCCAGGGCA ACGACCTGGG GTGTGGGCGC
GAGCTGTTCG GCTTCATGCG CATGGCGTTC AGCCCGGCAG AGCAGGGCGC CAGTGCCTTT
ACCTCGGCCC TGGAGCACCT CAAATGA
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| Protein sequence | MHPRILEVTQ RLVERSRATR ERYLQLIRGA ASEGPMRASL QCANFAHGVA GCGSEDKQTL
RLMNAANVAI VSAYNDMLSA HQPYLHFPEQ IKQALREVGS VGQFAGGVPA MCDGVTQGEP
GMELAIASRE VIAMSTAVAL SHNMFDAALM LGICDKIVPG LMMGALRFGH LPTIFVPGGP
MVSGISNKQK ADVRQRYAEG KASREELLES EMNSYHSPGT CTFYGTANTN QLVMEVMGLH
LPGASFVNPY TPLRDALTAE AAQQVTRMTK ASGSFMPLGE IVDEKALVNS IVALHATGGS
TNHTLHIPAI AQAAGIQLTW QDMADLSEVV PTLSHVYPNG KADINHFQAA GGMAFLIREL
LDAGLLHEDV NTVAGHGLRR YTQEPFLDNG KLVWREGPQH SLDESILRPV SRPFSAEGGL
RVMEGNLGRG VMKVSAVAPE HQVVEAPARV FQDQQSLADA FKAGELERDF VAVVRFQGPR
CNGMPELHKL TPFLGVLQDR GYKVALVTDG RMSGASGKIP AAIHVCPEAY DGGPLARVRD
GDIVRVDGVE GTLRIMVSAE ELASRELPPA PQGNDLGCGR ELFGFMRMAF SPAEQGASAF
TSALEHLK
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