Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1009 |
Symbol | gap-1 |
ID | 1041585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 1150008 |
End bp | 1151009 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637144404 |
Product | glyceraldehyde-3-phosphate dehydrogenase, type I |
Protein accession | NP_743170 |
Protein GI | 26987745 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTTC GCATCGCCAT CAATGGATTC GGCCGAATCG GGCGCAATGT CCTGCGCGCA CTGTATACCC AAGGCTACCG CCAGGACCTG CAGGTCGTCG CCATCAACGA CCTGGGCGAC AGCACCATGA ATGCCCACCT GCTCAAGTAC GACAGTGTCC ACGGCACCTT CGACGCGACC GTCGAGGCCG ACCACGAAAG CCTGACGGTC AACGGTGACC GTATCGCGGT CAGTGCCATT CGCAATCCGG CCGAACTGCC CTGGAAGGCC GAGGCGATCG ACGTGGTGTT CGAGTGCACC GGGCTGTTCA CCGACCGCGC CAAAGCCGCT GCGCACCTGG CCGCCGGGGC GGGCAAGGTG ATTGTCTCGG CGCCGGCCAA GGGTGCCGAT GCCACCGTGG TATACGGGGT CAACCACGAC ATCCTGCGCG CCTCGCACCA GATCATTTCC AATGCCTCCT GCACCACCAA CTGCCTGGCG CCGATCGCCC AGGTGCTGCA CCGTGAGTTC GGCATCGAGC AAGGCCTGAT GACCACCATC CACGCCTACA CCAACGACCA GGTGCTGACT GACGTTTACC ACAGCGACCC GTACCGCGCG CGTTCAGCCA CCCAGTCGAT GATCCCGAGC AAGACCGGTG CCGCCGAGGC CGTGGGCCTG GTGCTGCCGG AGCTGGCCGG CAAGCTGACC GGCATGGCGG TGCGGGTGCC CGTCATCAAC GTGTCGTTGG TGGACCTCAC CGTCAACCTC AAGCGCGAGG CCACGGCCGA GCAAGTGAAC CAGCTGTTCC TCGAGGCCAG CAAGCATTCC AAGGTATTGG GCTACAACGC TCTGCCATTG GTTTCCTGCG ATTTCAACCA CAACCCGCTG TCGTCGATCT TCGATGCCAA CCATACCCGG GCCAACGGGC GGATGCTCAA GGTGCTGGCC TGGTATGACA ACGAGTGGGG GTTCAGCAAC CGGATGCTGG ACAACTGCCT GGCGCTGCAC CGGGCTGGCT GA
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Protein sequence | MTLRIAINGF GRIGRNVLRA LYTQGYRQDL QVVAINDLGD STMNAHLLKY DSVHGTFDAT VEADHESLTV NGDRIAVSAI RNPAELPWKA EAIDVVFECT GLFTDRAKAA AHLAAGAGKV IVSAPAKGAD ATVVYGVNHD ILRASHQIIS NASCTTNCLA PIAQVLHREF GIEQGLMTTI HAYTNDQVLT DVYHSDPYRA RSATQSMIPS KTGAAEAVGL VLPELAGKLT GMAVRVPVIN VSLVDLTVNL KREATAEQVN QLFLEASKHS KVLGYNALPL VSCDFNHNPL SSIFDANHTR ANGRMLKVLA WYDNEWGFSN RMLDNCLALH RAG
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