| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1006 |
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| Symbol | |
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| ID | 1044939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 1145472 |
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| End bp | 1147751 |
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| Gene Length | 2280 bp |
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| Protein Length | 759 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637144401 |
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| Product | TonB-dependent hemoglobin/transferrin/lactoferrin family receptor |
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| Protein accession | NP_743167 |
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| Protein GI | 26987742 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein
[TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGGGGCA CCGGGCTGAG CTTTCGCAAG ATCAGCAACG GCAATGTGGT ACTGGAGCGC
CAAACCGCAA GCAACGTGAT CGCCCTGCAG CAGGTGACCG TCAGCGCCAC CCGCAGCGCA
CAGGACGTCA GCCAGGTGCC GAGCACTGTC AGCGTGCAGA CCCGTGAGCA ACTGGACCGG
CAGAACGTGA ACAATATCCA GGATCTGGTG CGCTACGAGC CGGGGGTTTC GGTATCCGGA
ACCGGCCAAC GCAGCGGGCT GAACGGCTAC AACATCCGTG GTATCGACGG CGAGCGGATC
CTCACCCAAG TCGACGGCGT GTCGATCCCC GACAGCTTCT TCTACGGCCC TTACGCCCAG
ACCCAGCGCA ACTACGTCGA CCCGGAAATC GTCAAGCGTG TGGAAATCCT CCGCGGCCCG
GCCTCGGTGT TGTATGGCAG CAACGCCATC GGCGGTGCGG TGAGCTACTT CACCCTCGAC
CCGGACGACA TCATCAAGCC CGGTAAAGAT GTGGGGGCAC GCCTGAAAAC CGGCTACAGC
TCGGCCGACG AAAGCTGGCT GACCTCCGCC ACCGTCGCCG GCCGCCAGGG TGACTTCGAC
GGCCTGCTGC ACCTGAGCCA GCGCAACGGC CACGAGACCG AAACCCACGG CAGCCACAGT
GGCGACGGCC TGTCGCGCAC CGAAGCCAAC CCGATGGATG CGCGCACCAC CAACGTGCTG
GCCAAGCTGG GCTGGAACTA CGCCGACGAC GCACGCCTGG GGTTCACCTA CGAGCGCTAC
AAGGATGACC GTGACCAGAA CATCCTCAGC GCGGTGGGTG GGCCGTTCAT TCCGGGCTTC
GGTGGCATGA ACTCGTACCG CATGCGCCAA GGCAACGACA CGATCACCCG TGAACGCTTC
GGCCTCAATC ATGAATTCGA CCTCGATAGC GTGGTCGCGG ATCACGTCAA ATGGAGTTTC
AACTACCAGA TCGCGAAGAC CGACCAACGT ACCGATGAGC TGTATGTCGC CTCGGGACGC
CAAGTGTTTC GGGACCGGCA GACTACCTAC AAGGATCGCC AGTGGGTATT CGACGCCCAA
TTGGACAAGG CCTTCAGCAT TGGCCAAACC GACCACCTGT TTACCTACGG CACCACACTC
AAACAGGAGA AAGTCACGGG TTCACGTAGC GGCACCGGCA CTTGCCTGAA CATCGGTGGT
ACCTGTACAG CCATCGGACA GGACAGCGCG CGTGACGGGC AGGCCTTGGT CAGCGACTTC
CCGGACCCGA CCGTGAATAC CTACAGCCTG TTCGCGCAGG ATGAAATCCG CTGGAACAAC
TGGACCTTCA TGCCCGGCGC GCGCTACGAC TACACCCGCA TGGAGCCCAA ATTCACGGAG
GAATTCCTGC GCGGTCTGGA GTCCAGCGGT ACGGCGCCTA CCGCCCAGGA CGATTCGGAC
AAGAAGTGGC ACCGCGTCTC GCCCAAGTTC GGCCTGACCT ACGCCTTCAA CGACAATTAC
ACCTGGTACG GCCAGTATGC AGAGGGCTTC CGCACGCCGA CCGCCAAAGC CATGTATGGC
CGCTTCCAGA ACCTGGACCA AGGCTACCGC GTGGAGGGCA ACCCTAACCT TGAGCCTGAA
AAGAGCAAAA GCTACGAAAC CGGCCTGCGT GGCAACTTCG ACGCCGGCAA CTTCGACGTG
GCAGTGTTCT ACAACAAGTA CCGTGATTTC ATCGACGAAG ATGCCGTGCA AAGCGCCAAC
CTGGAACAGA CCTTCCAGGC CAACAACATC AAGCACGCCA CGATCAAGGG TGCCGAATTC
AAGGGCCGCC TGAACCTCGA CCACTTCGGC GCACCGCAGG GTCTCTATAC CCAAACTTCG
ATTGCCTACA CCTATGGTCG TAACGATGAC ACCGGTCAGC CGCTGAACAG TGTCAACCCG
CTCAAAGGCG TATTCGGCCT GGGCTACGAG CAACAGAACT ACGGTGGCTT GCTGAGCTGG
ACGCTGGTCA AGCGCAAGAC CCGTGTCGAC GACAGCACCT TCTATTCGCC TGACGGTTCT
ACCTCGAAGT TCCGCACCCC GGGCTACGGT GTGCTGGACC TGACCGGTTA CTACAAGGTC
ACCGACGACG TCACCATCAA TGCCGGGCTG TACAACCTTA CCGACAAGAA ATACTGGCAG
TGGGATTCGG TGCGCAGCTA CGACGGCCAG GGTGAGGCGG CTGTGACCCA GCCAGCCAAC
ATCGACCGCC TGACCATGCC GGGGCGCAAC TTCGGTATCA ATGTGGTTTG GGATATCTGA
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| Protein sequence | MRGTGLSFRK ISNGNVVLER QTASNVIALQ QVTVSATRSA QDVSQVPSTV SVQTREQLDR
QNVNNIQDLV RYEPGVSVSG TGQRSGLNGY NIRGIDGERI LTQVDGVSIP DSFFYGPYAQ
TQRNYVDPEI VKRVEILRGP ASVLYGSNAI GGAVSYFTLD PDDIIKPGKD VGARLKTGYS
SADESWLTSA TVAGRQGDFD GLLHLSQRNG HETETHGSHS GDGLSRTEAN PMDARTTNVL
AKLGWNYADD ARLGFTYERY KDDRDQNILS AVGGPFIPGF GGMNSYRMRQ GNDTITRERF
GLNHEFDLDS VVADHVKWSF NYQIAKTDQR TDELYVASGR QVFRDRQTTY KDRQWVFDAQ
LDKAFSIGQT DHLFTYGTTL KQEKVTGSRS GTGTCLNIGG TCTAIGQDSA RDGQALVSDF
PDPTVNTYSL FAQDEIRWNN WTFMPGARYD YTRMEPKFTE EFLRGLESSG TAPTAQDDSD
KKWHRVSPKF GLTYAFNDNY TWYGQYAEGF RTPTAKAMYG RFQNLDQGYR VEGNPNLEPE
KSKSYETGLR GNFDAGNFDV AVFYNKYRDF IDEDAVQSAN LEQTFQANNI KHATIKGAEF
KGRLNLDHFG APQGLYTQTS IAYTYGRNDD TGQPLNSVNP LKGVFGLGYE QQNYGGLLSW
TLVKRKTRVD DSTFYSPDGS TSKFRTPGYG VLDLTGYYKV TDDVTINAGL YNLTDKKYWQ
WDSVRSYDGQ GEAAVTQPAN IDRLTMPGRN FGINVVWDI
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