| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1002 |
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| Symbol | arcD |
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| ID | 1044933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 1140999 |
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| End bp | 1142426 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637144397 |
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| Product | arginine/ornithine antiporter |
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| Protein accession | NP_743163 |
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| Protein GI | 26987738 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | [TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGATT CATCCGGAAA ACTAAAGCTC GGCGCGTTAG TTGCACTTGT CGTCGGCTCG
ATGATTGGCG GCGGTATCTT CTCGCTGCCA CAAAACATGG CCGCCAGCGC AGGGGTTGGG
GCCGTACTGA TCGGCTGGGC GATCACCGCA GTCGGCATGC TGACCCTGGC CTTCGTGTTC
CAGACCCTGG CCAACCGCAA GCCCGACCTG GATGGTGGGG TGTATGCGTA TGCCAAGGCT
GGCTTCGGCG ACTATATGGG CTTTTCCTCA GCCTGGGGCT ACTGGATCAG TGCCTGGCTG
GGCAACGTCG GCTACTTCGT GCTGCTGTTC AGCACCCTGG GCTACTTCTT CCCGATCTTC
GGTGAAGGCA ACACCCCAGC CGCCATAATT GGCGCGTCGA TCCTGTTGTG GGCGGTGCAC
TTCCTGGTAC TGCGCGGCAT CAAGGAAGCC GCCTTCATCA ACTTGGTCAC CACTGTGGCC
AAAGTGGTGC CGCTGGTGCT GTTCGCCCTG ATCTGCCTGT TCGCCTTCAG GCTCGACATC
TTCACCGCCG ATATCTGGGC CATGGGCACG CCAGAGCTTG GCAGTGTCAT GAACCAGGTG
CGCAACATGA TGCTGGTCAC CGTGTGGGTG TTCATCGGCA TCGAGGGCGC GAGCATCTTC
TCGGCGCGGG CGGAAAAACG CACCGACGTG GGCAAGGCAA CGGTGATCGG CTTCGTGACC
GTGCTGCTGT TCCTGGTGTT GGTCAACGTG CTGTCGCTGG GCATCATGAC TCAGCCGGAA
CTGGCCAAGC TGCAGAACCC GTCGATGGCT GCCGTGCTGG AGCATGTGGT CGGCCACTGG
GGGGCGGTGC TGATCAGCGT CGGCCTGGTC ATCTCGCTGC TCGGGGCGCT GCTGTCGTGG
GTGCTGCTGT GCGCCGAGAT CATGTTCGCC GCAGCCAAGG ACCACACCAT GCCGGAGTTC
CTGCGCCGCG AGAACGCCAA ACAGGTACCG GCCAACGCCC TGTGGCTGAC CAACGCCATG
GTGCAGATCT TTCTGGTCAT CACGCTGTTC TCAAGCAGCA CCTACCTGTC TCTGATCTAC
CTCGCCACCT CGATGATCCT GGTGCCCTAC CTGTGGTCGG CAGCCTATGC GTTCCTGCTG
GCACTGCGCA GCGAAACCTA CGAACAAGCC CTGGCCGAAC GCAAGAAGGA CCTGATCATC
GGTGGCATCG CCCTGTTGTA CGCCATCTGG CTGCTGTACG CCGGCGGCGT GAAATACCTG
CTGCTCTCTG CCCTGCTCTA CGCACCTGGC GCCATCCTGT TCGCCAAGGC CAAGCGTGAG
GTGGGCAAAC CGGTCTTCAC CAACGTGGAA AAACTGATCT TCGCAGCCGT GGTCATTGGC
GCCCTGGTGG CAGCCTATGG CCTGTATGAC GGCTTCCTGA CCCTTTGA
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| Protein sequence | MSDSSGKLKL GALVALVVGS MIGGGIFSLP QNMAASAGVG AVLIGWAITA VGMLTLAFVF
QTLANRKPDL DGGVYAYAKA GFGDYMGFSS AWGYWISAWL GNVGYFVLLF STLGYFFPIF
GEGNTPAAII GASILLWAVH FLVLRGIKEA AFINLVTTVA KVVPLVLFAL ICLFAFRLDI
FTADIWAMGT PELGSVMNQV RNMMLVTVWV FIGIEGASIF SARAEKRTDV GKATVIGFVT
VLLFLVLVNV LSLGIMTQPE LAKLQNPSMA AVLEHVVGHW GAVLISVGLV ISLLGALLSW
VLLCAEIMFA AAKDHTMPEF LRRENAKQVP ANALWLTNAM VQIFLVITLF SSSTYLSLIY
LATSMILVPY LWSAAYAFLL ALRSETYEQA LAERKKDLII GGIALLYAIW LLYAGGVKYL
LLSALLYAPG AILFAKAKRE VGKPVFTNVE KLIFAAVVIG ALVAAYGLYD GFLTL
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