Gene PP_0996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0996 
SymbolgltS 
ID1044926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1134131 
End bp1135336 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content56% 
IMG OID637144391 
Productsodium/glutamate symporter 
Protein accessionNP_743157 
Protein GI26987732 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0786] Na+/glutamate symporter 
TIGRFAM ID[TIGR00210] sodium--glutamate symport carrier (gltS) 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGAAC TCGATTTTTA CGGGACACTT GTAGCCGCCT CTTTGGTACT GCTACTGGGA 
CGCGGCCTGG TTGCACGCAT TGGTTTCCTG CGCGCATACA ATATCCCGGA GCCTGTTGCA
GGCGGCCTGG TCGTTGCCTT GTCACTCCTG GCATTGCGCA GTTTCGATGT ACACGTCCAA
TTTGATACCT CGTTGCAAAC ACCGTTGATG CTGGCATTCT TCGCTACCAT CGGCTTGAGT
GCAGACTTCG CAAGCCTGAA GAAGGGTGGA CGCGTGGTCG CCGTATTCCT TCTGGTGGTG
ACGGGTTTGC TAATGGTTCA GAACGCCATG GGCATCGGCC TGGCAACAGC ATTGGGGCTC
GACCCGCTGA TGGGCCTGCT AGCCGGATCG ATCAGCTTGT CGGGTGGCCA CGGCACAGGC
GCTGCCTGGG GCGCGACCTT CACTGAGCGG TTCGGCCTGG CTTCGGCTTC GGAACTGGCA
ATGGCCTCTG CCACTTTCGG CCTGGTGTTG GGCGGTTTGA TTGGTGGCCC AGTCGCCCGG
TTGCTGATCA AACGGGTCGA AACGCCTGGG GTGCAAGAAG AAGCACCGCA ATTACCCAAA
GGCTTTGAAC AACCGGACAA AGAGCGCCTG ATCACCTCGT TTTCATTTAT AGAAACCTTG
GCACTTATTG CTGTCAGCTT ACTGACGGGC ACATTACTTA ATGGCTTGTT GAAAGGCACA
GCATTCGAAC TGCCGACATT CGTTTGCGTA CTCTTCGTCG GTGTAGTGTT GCGCAATGGG
CTTCGGGCTT TAGGTGTTTA CAAAGTATTC GAACGGGAAG TGTCGGTACT GGGCAATGTG
AGTTTGTCCC TGTTCCTGGC CATTGCCTTG ATGTCGCTCA AGTTGTGGGA CCTGGCAGCC
CTGGCATTAC CCTTCTTTAC CTTGTTGGCC GCACAGACAC TGGTCATGGC GCTGTTCGCA
ATCTTCGTGA CGTTCAAGGT AATGGGGCGC AACTACGATG CAGCAGTCCT GGCTGCCGGC
CACTGTGGCT TCGGCCTGGG TGCTACACCG ACAGCCATCG CCAACATGCA GGCGGTGACA
CAACGCTATG GGGCCTCGCA CCTCGCCTTC CTGGTGGTGC CGATGGTGGG GGCGTTCTTC
ATCGACATCA TCAATGTCAT CGTGATCAAG CTGTACCTGG CATTGCCTTG GTTTGTTGCG
GGTTAA
 
Protein sequence
MFELDFYGTL VAASLVLLLG RGLVARIGFL RAYNIPEPVA GGLVVALSLL ALRSFDVHVQ 
FDTSLQTPLM LAFFATIGLS ADFASLKKGG RVVAVFLLVV TGLLMVQNAM GIGLATALGL
DPLMGLLAGS ISLSGGHGTG AAWGATFTER FGLASASELA MASATFGLVL GGLIGGPVAR
LLIKRVETPG VQEEAPQLPK GFEQPDKERL ITSFSFIETL ALIAVSLLTG TLLNGLLKGT
AFELPTFVCV LFVGVVLRNG LRALGVYKVF EREVSVLGNV SLSLFLAIAL MSLKLWDLAA
LALPFFTLLA AQTLVMALFA IFVTFKVMGR NYDAAVLAAG HCGFGLGATP TAIANMQAVT
QRYGASHLAF LVVPMVGAFF IDIINVIVIK LYLALPWFVA G