| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0989 |
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| Symbol | gcvH |
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| ID | 1044915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 1129560 |
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| End bp | 1129943 |
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| Gene Length | 384 bp |
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| Protein Length | 127 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637144384 |
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| Product | glycine cleavage system protein H |
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| Protein accession | NP_743150 |
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| Protein GI | 26987725 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0509] Glycine cleavage system H protein (lipoate-binding) |
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| TIGRFAM ID | [TIGR00527] glycine cleavage system H protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.236065 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGAGT TGCGTTTCAC TGAAGATCAC GAATGGCTGC GCGTCGAAGC CGATGGCAGC
GTCACCGTGG GCATCACCGC CTACGCCCAG AATGCCCTTG GCGACGTGGT TTTCGTGCAA
CTGCCAGAGT TGCAGCAGTA TGAAAAAGGC AACGAAGCGT CCACCGTCGA ATCGGTCAAG
GCCGCCAGCG GCGTGTACAT GCCACTGACG GGTGAAGTGG TCGAGGTCAA CGGCCAGCTC
GAAGACAGCC CTGAACTGGT CAACGAAGAC CCGATGGGCG AAGGCTGGTT CTTCCGCTTC
ATCCCTGCCG ATGCAGAAGC CGTAACCGCT CTGCTCGACC AGGACGCCTA CGACCGCCTG
CTCAAAGCCA ACGACGACGC CTGA
|
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| Protein sequence | MSELRFTEDH EWLRVEADGS VTVGITAYAQ NALGDVVFVQ LPELQQYEKG NEASTVESVK
AASGVYMPLT GEVVEVNGQL EDSPELVNED PMGEGWFFRF IPADAEAVTA LLDQDAYDRL
LKANDDA
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